RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 GJA4P35212 333 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 NEK3P51956 506 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 GEMP55040 296 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 RHOAP61586 193 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 KDSRQ06136 332 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 SLC12A1Q13621 1099 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 HTR4Q13639 388 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 SMAD1Q15797 465 aaKnown RBP18.74■□□□□ 0.59
CAPN3-209ENST00000466222 CES3Q6UWW8 571 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 RANBP10Q6VN20 620 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 E2F7Q96AV8 911 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 LRRC39Q96DD0 335 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 SMIM14Q96QK8 99 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 FSD1LQ9BXM9 530 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 TRIM55Q9BYV6 548 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 CASS4Q9NQ75 786 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 ZFP69BQ9UJL9 534 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 ZNF180Q9UJW8 692 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 TRIM33Q9UPN9 1127 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 SARNPP82979 210 aaKnown RBP18.74■□□□□ 0.59
CAPN3-209ENST00000466222 ECT2LQ008S8 904 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 AAK1Q2M2I8 961 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 ACCSLQ4AC99 568 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 ALG1LQ6GMV1 187 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 BBS5Q8N3I7 341 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 N4BP2L2Q92802 583 aaPredicted RBP18.74■□□□□ 0.59
CAPN3-209ENST00000466222 CFAP36Q96G28 342 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 SLC2A11Q9BYW1 496 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 MTG2Q9H4K7 406 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 FBRSL1Q9HCM7 1045 aaKnown RBP18.74■□□□□ 0.59
CAPN3-209ENST00000466222 XAB2Q9HCS7 855 aaKnown RBP18.74■□□□□ 0.59
CAPN3-209ENST00000466222 ZDHHC4Q9NPG8 344 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 LIMD1Q9UGP4 676 aa18.74■□□□□ 0.59
CAPN3-209ENST00000466222 TCRBV9S1A1TA0A576 114 aa18.73■□□□□ 0.59
CAPN3-209ENST00000466222 CCDC78A2IDD5 438 aa18.73■□□□□ 0.59
CAPN3-209ENST00000466222 ANHXE9PGG2 379 aa18.73■□□□□ 0.59
CAPN3-209ENST00000466222 ATP9BO43861 1147 aa18.73■□□□□ 0.59
CAPN3-209ENST00000466222 OPRD1P41143 372 aa18.73■□□□□ 0.59
CAPN3-209ENST00000466222 MPP3Q13368 585 aa18.73■□□□□ 0.59
CAPN3-209ENST00000466222 PTPRRQ15256 657 aa18.73■□□□□ 0.59
CAPN3-209ENST00000466222 WASHC2DQ5SRD0 308 aa18.73■□□□□ 0.59
CAPN3-209ENST00000466222 LGSNQ5TDP6 509 aa18.73■□□□□ 0.59
CAPN3-209ENST00000466222 CASC4Q6P4E1 433 aa18.73■□□□□ 0.59
CAPN3-209ENST00000466222 TRIM42Q8IWZ5 723 aa18.73■□□□□ 0.59
CAPN3-209ENST00000466222 AHI1Q8N157 1196 aa18.73■□□□□ 0.59
CAPN3-209ENST00000466222 ZNF366Q8N895 744 aa18.73■□□□□ 0.59
CAPN3-209ENST00000466222 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.73■□□□□ 0.59
CAPN3-209ENST00000466222 UTP4Q969X6 686 aaKnown RBP18.73■□□□□ 0.59
CAPN3-209ENST00000466222 SCUBE2Q9NQ36 999 aa18.73■□□□□ 0.59
CAPN3-209ENST00000466222 ERI2A8K979 691 aaKnown RBP18.72■□□□□ 0.59
CAPN3-209ENST00000466222 KLF11O14901 512 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 PRKCGP05129 697 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 PDHA1P08559 390 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 TARSP26639 723 aaKnown RBP18.72■□□□□ 0.59
CAPN3-209ENST00000466222 PTPN4P29074 926 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 SLC26A11Q86WA9 606 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 UNC5BQ8IZJ1 945 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 VOPP1Q96AW1 172 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 SLC7A6OSQ96CW6 309 aaPredicted RBP18.72■□□□□ 0.59
CAPN3-209ENST00000466222 MRGPRX3Q96LB0 322 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 ZNF778Q96MU6 729 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 NPHS2Q9NP85 383 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 BATF3Q9NR55 127 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 DEC1Q9P2X7 70 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 EVLQ9UI08 416 aaPredicted RBP18.72■□□□□ 0.59
CAPN3-209ENST00000466222 HAO1Q9UJM8 370 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 HS3ST2Q9Y278 367 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 MTO1Q9Y2Z2 717 aaKnown RBP18.72■□□□□ 0.59
CAPN3-209ENST00000466222 L3MBTL1Q9Y468 752 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 HELZP42694 1942 aaKnown RBP18.72■□□□□ 0.59
CAPN3-209ENST00000466222 SDR42E2A6NKP2 422 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 DNAJC6O75061 913 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 SERPINF2P08697 491 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 T-ENOLP0DO92 83 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 MLNP12872 115 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 POLR2EP19388 210 aaKnown RBP18.72■□□□□ 0.59
CAPN3-209ENST00000466222 ETV4P43268 484 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 GALNT3Q14435 633 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 POU6F1Q14863 301 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 DLG2Q15700 870 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 PTPRNQ16849 979 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 NAPEPLDQ6IQ20 393 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 CPA6Q8N4T0 437 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 TTC17Q96AE7 1141 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 THOC1Q96FV9 657 aaKnown RBP18.72■□□□□ 0.59
CAPN3-209ENST00000466222 MYO19Q96H55 970 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 NUDCD1Q96RS6 583 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 TSSK1BQ9BXA7 367 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 BRD9Q9H8M2 597 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 VPS45Q9NRW7 570 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 MKS1Q9NXB0 559 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 IL1RAPL1Q9NZN1 696 aa18.72■□□□□ 0.59
CAPN3-209ENST00000466222 ZC3H7BQ9UGR2 993 aaKnown RBP18.72■□□□□ 0.59
CAPN3-209ENST00000466222 A8MUI8 341 aa18.71■□□□□ 0.59
CAPN3-209ENST00000466222 TTC34A8MYJ7 566 aa18.71■□□□□ 0.59
CAPN3-209ENST00000466222 HGSO14964 777 aaPredicted RBP18.71■□□□□ 0.59
CAPN3-209ENST00000466222 KRT37O76014 449 aa18.71■□□□□ 0.59
CAPN3-209ENST00000466222 ASGR2P07307 311 aa18.71■□□□□ 0.59
CAPN3-209ENST00000466222 ATXN1LP0C7T5 689 aaKnown RBP18.71■□□□□ 0.59
CAPN3-209ENST00000466222 PIRTP0C851 137 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms