RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 ITGB2P05107 769 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 ITGA2BP08514 1039 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 KRT7P08729 469 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 CD48P09326 243 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 RHOXF2BP0C7M4 288 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 RARAP10276 462 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 NME1P15531 152 aaKnown RBP8.71□□□□□ -1.02
DDR1-242ENST00000465966 CCR1P32246 355 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 CHRNA3P32297 505 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 NOS2P35228 1153 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 PTPN7P35236 360 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 RECQLP46063 649 aaPredicted RBP8.71□□□□□ -1.02
DDR1-242ENST00000465966 RABIFP47224 123 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 YWHAZP63104 245 aaKnown RBP8.71□□□□□ -1.02
DDR1-242ENST00000465966 MRPS25P82663 173 aaKnown RBP8.71□□□□□ -1.02
DDR1-242ENST00000465966 SRSF1Q07955 248 aaKnown RBP eCLIP8.71□□□□□ -1.02
DDR1-242ENST00000465966 KLF1Q13351 362 aaPredicted RBP8.71□□□□□ -1.02
DDR1-242ENST00000465966 SPIDRQ14159 915 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 TAZQ16635 292 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 CA9Q16790 459 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 HADHQ16836 314 aaKnown RBP8.71□□□□□ -1.02
DDR1-242ENST00000465966 COLEC12Q5KU26 742 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 GUSBP11Q6P575 273 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 MFSD7Q6UXD7 560 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 SPOCD1Q6ZMY3 1216 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 ZNF574Q6ZN55 896 aaPredicted RBP8.71□□□□□ -1.02
DDR1-242ENST00000465966 GCNT7Q6ZNI0 430 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 ERN2Q76MJ5 926 aaKnown RBP8.71□□□□□ -1.02
DDR1-242ENST00000465966 STRADAQ7RTN6 431 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 CLEC14AQ86T13 490 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 CIR1Q86X95 450 aaPredicted RBP8.71□□□□□ -1.02
DDR1-242ENST00000465966 SLC22A18ASQ8N1D0 253 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 SH2D3CQ8N5H7 860 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 CCDC185Q8N715 623 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 PRELID2Q8N945 189 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 EXD3Q8N9H8 876 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 ATP11CQ8NB49 1132 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 LMX1AQ8TE12 382 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 BTN2A2Q8WVV5 523 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 RAPGEF5Q92565 580 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 HSPH1Q92598 858 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 NAT6Q93015 286 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 NT5C3BQ969T7 300 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 RNF25Q96BH1 459 aaPredicted RBP8.71□□□□□ -1.02
DDR1-242ENST00000465966 SGF29Q96ES7 293 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 PRR11Q96HE9 360 aaPredicted RBP8.71□□□□□ -1.02
DDR1-242ENST00000465966 RBM41Q96IZ5 413 aaKnown RBP8.71□□□□□ -1.02
DDR1-242ENST00000465966 FEM1CQ96JP0 617 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 RPRD1AQ96P16 312 aaPredicted RBP8.71□□□□□ -1.02
DDR1-242ENST00000465966 KRT12Q99456 494 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 NPY6RQ99463 290 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 RHOXF2Q9BQY4 288 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 FEM1AQ9BSK4 669 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 SNRNP25Q9BV90 132 aaKnown RBP8.71□□□□□ -1.02
DDR1-242ENST00000465966 SLC17A9Q9BYT1 436 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 OSBPL8Q9BZF1 889 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 DDX47Q9H0S4 455 aaKnown RBP8.71□□□□□ -1.02
DDR1-242ENST00000465966 MUC3BQ9H195 1237 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 POPDC2Q9HBU9 364 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 GPATCH2LQ9NWQ4 482 aa8.71□□□□□ -1.02
DDR1-242ENST00000465966 DDX56Q9NY93 547 aaKnown RBP8.71□□□□□ -1.02
DDR1-242ENST00000465966 ATXN7L1Q9ULK2 861 aaPredicted RBP8.71□□□□□ -1.02
DDR1-242ENST00000465966 PLXNA2O75051 1894 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 SPTY2D1-AS1A0A0U1RR47 76 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 TMX2-CTNND1H3BSU7 103 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 CCDC188H7C350 402 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 DYNC1I1O14576 645 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 FPGTO14772 594 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 MUSKO15146 869 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 RAD51CO43502 376 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 PHF2O75151 1096 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 CLDN11O75508 207 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 ENDOD1O94919 500 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 ZRANB2O95218 330 aaKnown RBP eCLIP8.7□□□□□ -1.02
DDR1-242ENST00000465966 JUNDP17535 347 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 CDKN2BP42772 138 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 ARSEP51690 589 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 RPS21P63220 83 aaKnown RBP8.7□□□□□ -1.02
DDR1-242ENST00000465966 ADCY2Q08462 1091 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 SGCGQ13326 291 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 EIF3IQ13347 325 aaKnown RBP8.7□□□□□ -1.02
DDR1-242ENST00000465966 FZD2Q14332 565 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 PPP2R5EQ16537 467 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 DEFB133Q30KQ1 61 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 SLC25A52Q3SY17 297 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 ZFYVE27Q5T4F4 411 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 SEL1L3Q68CR1 1132 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 CXorf57Q6NSI4 855 aaKnown RBP8.7□□□□□ -1.02
DDR1-242ENST00000465966 KIAA1161Q6NSJ0 714 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 ESRP1Q6NXG1 681 aaKnown RBP8.7□□□□□ -1.02
DDR1-242ENST00000465966 C8orf74Q6P047 294 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 FBXL22Q6P050 247 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 TTC27Q6P3X3 843 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 KYAT3Q6YP21 454 aaKnown RBP8.7□□□□□ -1.02
DDR1-242ENST00000465966 C14orf80Q86SX3 495 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 FAM131BQ86XD5 332 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 LURAP1LQ8IV03 231 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 KLHL7Q8IXQ5 586 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 ZSCAN1Q8NBB4 408 aa8.7□□□□□ -1.02
DDR1-242ENST00000465966 TEKT4Q8WW24 435 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms