RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 FCRL5Q96RD9 977 aa20.42■□□□□ 0.86
SKA3-205ENST00000465471 RBM15Q96T37 977 aaKnown RBP eCLIP20.42■□□□□ 0.86
SKA3-205ENST00000465471 FRMD8P1Q9BZ68 369 aaPredicted RBP20.42■□□□□ 0.86
SKA3-205ENST00000465471 PCDH9Q9HC56 1237 aa20.42■□□□□ 0.86
SKA3-205ENST00000465471 KLHL8Q9P2G9 620 aaPredicted RBP20.42■□□□□ 0.86
SKA3-205ENST00000465471 CHKBQ9Y259 395 aa20.42■□□□□ 0.86
SKA3-205ENST00000465471 A0A0J9YYE9 177 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 CDX4O14627 284 aaPredicted RBP20.41■□□□□ 0.86
SKA3-205ENST00000465471 ENC1O14682 589 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 RAD51BO15315 384 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 KIF5CO60282 957 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 TM7SF2O76062 418 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 PAK4O96013 591 aaPredicted RBP20.41■□□□□ 0.86
SKA3-205ENST00000465471 TRBC1P01850 177 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 SYPP08247 313 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 C6P13671 934 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 GM2AP17900 193 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 AKT2P31751 481 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 LIG3P49916 1009 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 FAM193AP78312 1265 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 ARHGAP8P85298 464 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 SEMG2Q02383 582 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 DARS2Q6PI48 645 aaKnown RBP20.41■□□□□ 0.86
SKA3-205ENST00000465471 LIPIQ6XZB0 460 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 GCNT7Q6ZNI0 430 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 ABI3BPQ7Z7G0 1075 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 CBARPQ8N350 705 aaPredicted RBP20.41■□□□□ 0.86
SKA3-205ENST00000465471 MFSD2AQ8NA29 543 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 SPATA22Q8NHS9 363 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 CENPTQ96BT3 561 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 GBA3Q9H227 469 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 FZD3Q9NPG1 666 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 AASDHPPTQ9NRN7 309 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 GPR27Q9NS67 375 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 KCND1Q9NSA2 647 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 DNPEPQ9ULA0 475 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 CA5BQ9Y2D0 317 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 ANKRD6Q9Y2G4 727 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 HS3ST3A1Q9Y663 406 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 TMEM131Q92545 1883 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 KNL1Q8NG31 2342 aa20.41■□□□□ 0.86
SKA3-205ENST00000465471 NPIPB15A6NHN6 443 aaPredicted RBP20.4■□□□□ 0.86
SKA3-205ENST00000465471 KCNN4O15554 427 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 MT-CYBP00156 380 aaPredicted RBP20.4■□□□□ 0.86
SKA3-205ENST00000465471 LHCGRP22888 699 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 NFKBIAP25963 317 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 VIPR1P32241 457 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 CTSKP43235 329 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 DNAH14Q0VDD8 3507 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 OVGP1Q12889 678 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 SGCGQ13326 291 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 OASLQ15646 514 aaKnown RBP20.4■□□□□ 0.86
SKA3-205ENST00000465471 CNGA3Q16281 694 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 KIF19Q2TAC6 998 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 KDELC1Q6UW63 502 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 USP45Q70EL2 814 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 PID1Q7Z2X4 250 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 PAF1Q8N7H5 531 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 TP53I13Q8NBR0 393 aaPredicted RBP20.4■□□□□ 0.86
SKA3-205ENST00000465471 NETO1Q8TDF5 533 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 ATG4AQ8WYN0 398 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 RTP4Q96DX8 246 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 SPATA13Q96N96 652 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 LYSMD1Q96S90 227 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 FERMT1Q9BQL6 677 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 GORASP1Q9BQQ3 440 aa20.4■□□□□ 0.86
SKA3-205ENST00000465471 C5orf60A6NFR6 353 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 CAPN8A6NHC0 703 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 H0Y8X5 98 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 LIASO43766 372 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 HEXIM1O94992 359 aaKnown RBP20.39■□□□□ 0.85
SKA3-205ENST00000465471 ATP1A1P05023 1023 aaKnown RBP20.39■□□□□ 0.85
SKA3-205ENST00000465471 ELFN1P0C7U0 828 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 CYP2A6P11509 494 aaPredicted RBP20.39■□□□□ 0.85
SKA3-205ENST00000465471 CXCR5P32302 372 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 NXPH1P58417 271 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 STAT4Q14765 748 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 PTPRRQ15256 657 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 ANKRD20A2Q5SQ80 823 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 ANKRD20A1Q5TYW2 823 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 ANKRD20A3Q5VUR7 823 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 KYAT3Q6YP21 454 aaKnown RBP20.39■□□□□ 0.85
SKA3-205ENST00000465471 RASGEF1CQ8N431 466 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 FAM174AQ8TBP5 190 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 OXNAD1Q96HP4 312 aaPredicted RBP20.39■□□□□ 0.85
SKA3-205ENST00000465471 BMFQ96LC9 184 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 COQ10AQ96MF6 247 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 SMIM14Q96QK8 99 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 MYOCQ99972 504 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 TMEM9BQ9NQ34 198 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 FAM153AQ9UHL3 310 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 ZKSCAN5Q9Y2L8 839 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 COQ6Q9Y2Z9 468 aa20.39■□□□□ 0.85
SKA3-205ENST00000465471 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.38■□□□□ 0.85
SKA3-205ENST00000465471 TLR4O00206 839 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 PSMD11O00231 422 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 OPHN1O60890 802 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 FGGP02679 453 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 ALPIP09923 528 aa20.38■□□□□ 0.85
SKA3-205ENST00000465471 CTPS1P17812 591 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms