RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 TUBB4AP04350 444 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 PDHA1P08559 390 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 ZNF806P0C7X5 589 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 GOLGA6DP0CG33 693 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 HOXD11P31277 338 aaPredicted RBP17.03■□□□□ 0.32
USP39-211ENST00000465282 GEMP55040 296 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 PPP2CBP62714 309 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 RACK1P63244 317 aaKnown RBP17.03■□□□□ 0.32
USP39-211ENST00000465282 PPP2CAP67775 309 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 FAM193AP78312 1265 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 CDK18Q07002 472 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 AGERQ15109 404 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 PARP6Q2NL67 630 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 SLC23A3Q6PIS1 610 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 ARHGEF18Q6ZSZ5 1173 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 RAVER1Q8IY67 606 aaKnown RBP17.03■□□□□ 0.32
USP39-211ENST00000465282 SPATA22Q8NHS9 363 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 SKA1Q96BD8 255 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 LYSMD1Q96S90 227 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 ORAI3Q9BRQ5 295 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 GOLGA6AQ9NYA3 693 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 CHKBQ9Y259 395 aa17.03■□□□□ 0.32
USP39-211ENST00000465282 PSMD11O00231 422 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 PSMD3O43242 534 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 GFRA3O60609 400 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 NDST3O95803 873 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 MT-CYBP00156 380 aaPredicted RBP17.02■□□□□ 0.32
USP39-211ENST00000465282 HNRNPA2B1P22626 353 aaKnown RBP17.02■□□□□ 0.32
USP39-211ENST00000465282 MAOBP27338 520 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 VIPR1P32241 457 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 AFF3P51826 1226 aaKnown RBP17.02■□□□□ 0.32
USP39-211ENST00000465282 SNX1Q13596 522 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 TEAD4Q15561 434 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 CSRP2Q16527 193 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 CYP1B1Q16678 543 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 LRRC73Q5JTD7 316 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 NAPEPLDQ6IQ20 393 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 KLHDC8BQ8IXV7 354 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 PRELID2Q8N945 189 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 DENND6BQ8NEG7 585 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 CCDC110Q8TBZ0 833 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 MS4A14Q96JA4 679 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 TRIB3Q96RU7 358 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 MLPHQ9BV36 600 aaPredicted RBP17.02■□□□□ 0.32
USP39-211ENST00000465282 MIR1-1HGQ9H1L0 117 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 TMEM74BQ9NUR3 256 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 FEZ2Q9UHY8 353 aaPredicted RBP17.02■□□□□ 0.32
USP39-211ENST00000465282 ITM2BQ9Y287 266 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 HS3ST3A1Q9Y663 406 aa17.02■□□□□ 0.32
USP39-211ENST00000465282 FAM186AA6NE01 2351 aa17.02■□□□□ 0.31
USP39-211ENST00000465282 LOC285095A0A1B0GVY8 99 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 IGLON5A6NGN9 336 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 CAPN8A6NHC0 703 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 KHNYNO15037 678 aaKnown RBP17.01■□□□□ 0.31
USP39-211ENST00000465282 PMPCBO75439 489 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 ELFN1P0C7U0 828 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 ZNF30P17039 623 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 MAT2AP31153 395 aaKnown RBP17.01■□□□□ 0.31
USP39-211ENST00000465282 CASQ1P31415 396 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 AKT2P31751 481 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 LIG3P49916 1009 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 WNT3AP56704 352 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 OVGP1Q12889 678 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 SEL1L3Q68CR1 1132 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 KDELC1Q6UW63 502 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 LIPIQ6XZB0 460 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 NYAP1Q6ZVC0 841 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 IQCHQ86VS3 1027 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 C17orf53Q8N3J3 647 aaPredicted RBP17.01■□□□□ 0.31
USP39-211ENST00000465282 CCDC89Q8N998 374 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 C12orf50Q8NA57 414 aaPredicted RBP17.01■□□□□ 0.31
USP39-211ENST00000465282 ATL2Q8NHH9 583 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 SERAC1Q96JX3 654 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 HINFPQ9BQA5 517 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 NUSAP1Q9BXS6 441 aaKnown RBP17.01■□□□□ 0.31
USP39-211ENST00000465282 ZDHHC5Q9C0B5 715 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 EBF2Q9HAK2 575 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 TM9SF3Q9HD45 589 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 B4GALT6Q9UBX8 382 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 GGT7Q9UJ14 662 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 SLC6A14Q9UN76 642 aa17.01■□□□□ 0.31
USP39-211ENST00000465282 EP300Q09472 2414 aaPredicted RBP17.01■□□□□ 0.31
USP39-211ENST00000465282 ERI2A8K979 691 aaKnown RBP17■□□□□ 0.31
USP39-211ENST00000465282 KIF2AO00139 706 aaPredicted RBP17■□□□□ 0.31
USP39-211ENST00000465282 TOR1BO14657 336 aa17■□□□□ 0.31
USP39-211ENST00000465282 ZNF185O15231 689 aa17■□□□□ 0.31
USP39-211ENST00000465282 SLC31A1O15431 190 aa17■□□□□ 0.31
USP39-211ENST00000465282 MAGEC1O60732 1142 aa17■□□□□ 0.31
USP39-211ENST00000465282 MMP20O60882 483 aa17■□□□□ 0.31
USP39-211ENST00000465282 HEXIM1O94992 359 aaKnown RBP17■□□□□ 0.31
USP39-211ENST00000465282 PAK4O96013 591 aaPredicted RBP17■□□□□ 0.31
USP39-211ENST00000465282 ITIH2P19823 946 aa17■□□□□ 0.31
USP39-211ENST00000465282 HLA-DPA1P20036 260 aa17■□□□□ 0.31
USP39-211ENST00000465282 HNF1BP35680 557 aa17■□□□□ 0.31
USP39-211ENST00000465282 FDFT1P37268 417 aa17■□□□□ 0.31
USP39-211ENST00000465282 GDF10P55107 478 aa17■□□□□ 0.31
USP39-211ENST00000465282 SPEM2Q0P670 501 aa17■□□□□ 0.31
USP39-211ENST00000465282 RALGDSQ12967 914 aa17■□□□□ 0.31
USP39-211ENST00000465282 ARHGEF7Q14155 803 aa17■□□□□ 0.31
USP39-211ENST00000465282 STAT4Q14765 748 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms