RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 PARD6AQ9NPB6 346 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 AMACRQ9UHK6 382 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 SHOC2Q9UQ13 582 aa11.94□□□□□ -0.5
APTX-213ENST00000465003 MYLKQ15746 1914 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 RIF1Q5UIP0 2472 aaKnown RBP11.93□□□□□ -0.5
APTX-213ENST00000465003 SLC7A4O43246 635 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 STK10O94804 968 aaKnown RBP11.93□□□□□ -0.5
APTX-213ENST00000465003 CFIP05156 583 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 C6P13671 934 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 TCP1P17987 556 aaKnown RBP11.93□□□□□ -0.5
APTX-213ENST00000465003 HNF1BP35680 557 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 CSNK1EP49674 416 aaKnown RBP11.93□□□□□ -0.5
APTX-213ENST00000465003 LIG3P49916 1009 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 CCNG2Q16589 344 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 KDELC1Q6UW63 502 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 HORMAD1Q86X24 394 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 PELI3Q8N2H9 469 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 ACTRT1Q8TDG2 376 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 CXorf40AQ8TE69 158 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 SERAC1Q96JX3 654 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 TRIB3Q96RU7 358 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 FICDQ9BVA6 458 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 AASDHPPTQ9NRN7 309 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 FAM153AQ9UHL3 310 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 CD84Q9UIB8 345 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 GMEB2Q9UKD1 530 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 PILRBQ9UKJ0 227 aa11.93□□□□□ -0.5
APTX-213ENST00000465003 TTC7AQ9ULT0 858 aaPredicted RBP11.93□□□□□ -0.5
APTX-213ENST00000465003 A0A1W2PPC4 97 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 AURKAO14965 403 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 BUD23O43709 281 aaKnown RBP11.92□□□□□ -0.5
APTX-213ENST00000465003 GFRA3O60609 400 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 ELFN1P0C7U0 828 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 CDK18Q07002 472 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 CNGA3Q16281 694 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 QPCTQ16769 361 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 TMEM259Q4ZIN3 620 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 PRAMEF14Q5SWL7 426 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 LRRC66Q68CR7 880 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 LAIR1Q6GTX8 287 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 ERAP2Q6P179 960 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 KLHL7Q8IXQ5 586 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 CCDC89Q8N998 374 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 CADM4Q8NFZ8 388 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 FOXJ1Q92949 421 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 TADA1Q96BN2 335 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 IFT43Q96FT9 208 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 FCRL5Q96RD9 977 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 VAT1Q99536 393 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 FSD1LQ9BXM9 530 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 PREBQ9HCU5 417 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 TRHDEQ9UKU6 1024 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 TP53BP1Q12888 1972 aaPredicted RBP11.92□□□□□ -0.5
APTX-213ENST00000465003 A0A0J9YYE9 177 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 C5orf60A6NFR6 353 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 LATO43561 262 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 OPHN1O60890 802 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 EPN2O95208 641 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 CLDN7O95471 211 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 TRBC1P01850 177 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 WNT1P04628 370 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 ITGAVP06756 1048 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 GM2AP17900 193 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 ETV3P41162 512 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 IRX4P78413 519 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 SFSWAPQ12872 951 aaKnown RBP11.92□□□□□ -0.5
APTX-213ENST00000465003 HS1BP3Q53T59 392 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 TRIM61Q5EBN2 209 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 SIRPB2Q5JXA9 342 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 CCDC137Q6PK04 289 aaKnown RBP11.92□□□□□ -0.5
APTX-213ENST00000465003 LIPIQ6XZB0 460 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 HSD11B1LQ7Z5J1 315 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 PDCD7Q8N8D1 485 aaKnown RBP11.92□□□□□ -0.5
APTX-213ENST00000465003 FEM1CQ96JP0 617 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 FERMT1Q9BQL6 677 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 SLC17A9Q9BYT1 436 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 TM9SF3Q9HD45 589 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 MBNL1Q9NR56 388 aaKnown RBP11.92□□□□□ -0.5
APTX-213ENST00000465003 HAUS2Q9NVX0 235 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 FNDC3AQ9Y2H6 1198 aaKnown RBP11.92□□□□□ -0.5
APTX-213ENST00000465003 SPO11Q9Y5K1 396 aa11.92□□□□□ -0.5
APTX-213ENST00000465003 TMEM131Q92545 1883 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 C1orf232A0A0U1RR37 186 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 GOLGA6CA6NDK9 693 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 GOLGA6BA6NDN3 693 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 POM121BA6NF01 834 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 ANKRD66B4E2M5 251 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 ATXN1LP0C7T5 689 aaKnown RBP11.91□□□□□ -0.5
APTX-213ENST00000465003 GOLGA6DP0CG33 693 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 RPL22P35268 128 aaKnown RBP11.91□□□□□ -0.5
APTX-213ENST00000465003 GRIA1P42261 906 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 RPS21P63220 83 aaKnown RBP11.91□□□□□ -0.5
APTX-213ENST00000465003 ACOX1Q15067 660 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 RALGPS1Q5JS13 557 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 ITPRIPL1Q6GPH6 555 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 CRTC1Q6UUV9 634 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 USP45Q70EL2 814 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 DPPA4Q7L190 304 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 LYSMD3Q7Z3D4 306 aa11.91□□□□□ -0.5
APTX-213ENST00000465003 C11orf74Q86VG3 221 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms