RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 A0A1W2PR77 199 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 USP27XA6NNY8 438 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 A8MX80 341 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 KCNN4O15554 427 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 ZNF189O75820 626 aaPredicted RBP14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 PRLP01236 227 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 WNT1P04628 370 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 CYP2A6P11509 494 aaPredicted RBP14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 CXCR5P32302 372 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 EPHB1P54762 984 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 C21orf59P57076 290 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 RPL26P61254 145 aaKnown RBP14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 RALGDSQ12967 914 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 SLC14A2Q15849 920 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 KIF19Q2TAC6 998 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 IL27RAQ6UWB1 636 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 LAYNQ6UX15 382 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 DPPA4Q7L190 304 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 MFSD2AQ8NA29 543 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 SPATA22Q8NHS9 363 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 TADA1Q96BN2 335 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 GTPBP2Q9BX10 602 aaKnown RBP14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 C1QTNF7Q9BXJ2 289 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 ADGRE3Q9BY15 652 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 USP29Q9HBJ7 922 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 TMEM9BQ9NQ34 198 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 B4GALT6Q9UBX8 382 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 RPL26L1Q9UNX3 145 aaKnown RBP14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 CA5BQ9Y2D0 317 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 HS3ST3A1Q9Y663 406 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 PCDH15Q96QU1 1955 aa14.58□□□□□ -0.08
SQSTM1-205ENST00000464493 TLR4O00206 839 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 CDX4O14627 284 aaPredicted RBP14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 RAD51BO15315 384 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 LZTS3O60299 673 aaPredicted RBP14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 CEP104O60308 925 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 STK10O94804 968 aaKnown RBP14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 MT-CYBP00156 380 aaPredicted RBP14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 ELFN1P0C7U0 828 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 C6P13671 934 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 CTPS1P17812 591 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 NFKB1P19838 968 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 VIPR1P32241 457 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 BNC1Q01954 994 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 OVGP1Q12889 678 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 LIPIQ6XZB0 460 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 USP45Q70EL2 814 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 IQCHQ86VS3 1027 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 SLC35F6Q8N357 371 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 DENND6BQ8NEG7 585 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 LPCAT1Q8NF37 534 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 SLC35B2Q8TB61 432 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 FAM174AQ8TBP5 190 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 NETO1Q8TDF5 533 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 CENPTQ96BT3 561 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 KLHDC7BQ96G42 594 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 BMFQ96LC9 184 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 FCRL5Q96RD9 977 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 MCCC1Q96RQ3 725 aaPredicted RBP14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 KLF6Q99612 283 aaPredicted RBP14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 FRMD8P1Q9BZ68 369 aaPredicted RBP14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 FAM153AQ9UHL3 310 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 DNPEPQ9ULA0 475 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 COQ6Q9Y2Z9 468 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 SNX11Q9Y5W9 270 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.57□□□□□ -0.083e-8■■■□□ 15.5
SQSTM1-205ENST00000464493 LRRK1Q38SD2 2015 aa14.57□□□□□ -0.08
SQSTM1-205ENST00000464493 A0A0J9YYE9 177 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 C4orf47A7E2U8 309 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 ANKRD66B4E2M5 251 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 H0Y8X5 98 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 FPGTO14772 594 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 MAGEC1O60732 1142 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 PMPCBO75439 489 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 TRBC1P01850 177 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 FGGP02679 453 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 ALPIP09923 528 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 HNF1BP35680 557 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 CTSKP43235 329 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 LIMK1P53667 647 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 CLDN2P57739 230 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 CDK18Q07002 472 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 AGERQ15109 404 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 PTPRRQ15256 657 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 PCSK7Q16549 785 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 HLA-BQ31612 363 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 ANKRD20A2Q5SQ80 823 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 STPG1Q5TH74 334 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 ANKRD20A1Q5TYW2 823 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 ANKRD20A3Q5VUR7 823 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 ITPRIPL1Q6GPH6 555 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 KDELC2Q7Z4H8 507 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 ABI3BPQ7Z7G0 1075 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 MINDY1Q8N5J2 469 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 FAM71DQ8N9W8 422 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 MAIP1Q8WWC4 291 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 C1orf54Q8WWF1 131 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 ATG4AQ8WYN0 398 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 RMDN1Q96DB5 314 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms