RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 C8orf33Q9H7E9 229 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 GRPEL1Q9HAV7 217 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 PRMT7Q9NVM4 692 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 PTGFRNQ9P2B2 879 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 TUBGCP4Q9UGJ1 667 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 AGO2Q9UKV8 859 aaKnown RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 MTO1Q9Y2Z2 717 aaKnown RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 PCDHA13Q9Y5I0 950 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 PIAS3Q9Y6X2 628 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 SDK1Q7Z5N4 2213 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 ASXL3Q9C0F0 2248 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 LAMA1P25391 3075 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 WDR27A2RRH5 827 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 MYBPHLA2RUH7 354 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 C4orf47A7E2U8 309 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 LACTBL1A8MY62 500 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 CDX4O14627 284 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 OGTO15294 1046 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 CLDN3O15551 220 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 HCRTO43612 131 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 CALUO43852 315 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 EXTL3O43909 919 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 EXOC3O60645 756 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 ERLIN2O94905 339 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 ABLIM3O94929 683 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 VNN1O95497 513 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 CALCAP01258 141 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 PNMA6AP0CW24 399 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 CEBPBP17676 345 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 GCSHP23434 173 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 GDI1P31150 447 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 PBX1P40424 430 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 MLH1P40692 756 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 GCLMP48507 274 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 EFNA5P52803 228 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 MXRA7P84157 204 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 FKBP3Q00688 224 aaKnown RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 CYP24A1Q07973 514 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 ALCAMQ13740 583 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 PSMD5Q16401 504 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 SNRNP35Q16560 246 aaKnown RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 PLK5Q496M5 336 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 FAM171A1Q5VUB5 890 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 DAB2IPQ5VWQ8 1189 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 JADE1Q6IE81 842 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 SPOPLQ6IQ16 392 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 PGM2L1Q6PCE3 622 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 CD300LGQ6UXG3 332 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 DDX42Q86XP3 938 aaKnown RBP eCLIP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 CREBRFQ8IUR6 639 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 BRSK2Q8IWQ3 736 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 FAM186BQ8IYM0 893 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 GPD1LQ8N335 351 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 XXYLT1Q8NBI6 393 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 LMO3Q8TAP4 145 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 TBC1D15Q8TC07 691 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 DEPDC1BQ8WUY9 529 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 ING5Q8WYH8 240 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 SMARCD2Q92925 531 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 CCDC34Q96HJ3 373 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 COQ10AQ96MF6 247 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 CRACR2AQ9BSW2 395 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 PI4K2AQ9BTU6 479 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 THAP9Q9H5L6 903 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 TMEM206Q9H813 350 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 APOBEC3GQ9HC16 384 aaKnown RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 SIX2Q9NPC8 291 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 CASS4Q9NQ75 786 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 IFNKQ9P0W0 207 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 HSFX1Q9UBD0 423 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 MTRRQ9UBK8 725 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 LIMA1Q9UHB6 759 aaKnown RBP3.82□□□□□ -1.8
SCFD1-204ENST00000463622 SIX4Q9UIU6 781 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 NME7Q9Y5B8 376 aa3.82□□□□□ -1.8
SCFD1-204ENST00000463622 ANK1P16157 1881 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 ARHGEF17Q96PE2 2063 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-204ENST00000463622 SF3B1O75533 1304 aaKnown RBP eCLIP3.81□□□□□ -1.83e-6■■■■■ 57.3
SCFD1-204ENST00000463622 GCN1Q92616 2671 aaKnown RBP3.81□□□□□ -1.8
SCFD1-204ENST00000463622 MAST4O15021 2626 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 TTC26A0AVF1 554 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 FAM170AA1A519 330 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 BICDL2A1A5D9 508 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 BCLAF3A2AJT9 711 aaKnown RBP3.81□□□□□ -1.8
SCFD1-204ENST00000463622 GOLGA6L3A6NEY3 463 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 BECN2A8MW95 431 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 MASP2O00187 686 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 ZNF197O14709 1029 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 MGST3O14880 152 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 ZNF263O14978 683 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 CETN3O15182 167 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 CHADO15335 359 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 SLC16A3O15427 465 aaKnown RBP3.81□□□□□ -1.8
SCFD1-204ENST00000463622 ERN1O75460 977 aaKnown RBP3.81□□□□□ -1.8
SCFD1-204ENST00000463622 RPP40O75818 363 aaKnown RBP3.81□□□□□ -1.8
SCFD1-204ENST00000463622 NOL4O94818 638 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 ESRRBO95718 433 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 MT-CO1P00395 513 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 DLATP10515 647 aaKnown RBP3.81□□□□□ -1.8
SCFD1-204ENST00000463622 MCF2P10911 925 aa3.81□□□□□ -1.8
SCFD1-204ENST00000463622 FDXRP22570 491 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms