RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 OASLQ15646 514 aaKnown RBP19.89■□□□□ 0.77
COL9A3-204ENST00000463487 TRIM61Q5EBN2 209 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 SEL1L3Q68CR1 1132 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 SPATA22Q8NHS9 363 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 FAM174AQ8TBP5 190 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 CCDC110Q8TBZ0 833 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 NSMCE3Q96MG7 304 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 WDR24Q96S15 920 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 TM9SF3Q9HD45 589 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 TMEM74BQ9NUR3 256 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 GGT7Q9UJ14 662 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 SLC6A14Q9UN76 642 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 ZFR2Q9UPR6 939 aaKnown RBP19.89■□□□□ 0.77
COL9A3-204ENST00000463487 PPIL1Q9Y3C6 166 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 SAR1BQ9Y6B6 198 aa19.89■□□□□ 0.77
COL9A3-204ENST00000463487 A0A0J9YYE9 177 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 IGLON5A6NGN9 336 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 SPINT1O43278 529 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 MMP20O60882 483 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 GCATO75600 419 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 MT-CYBP00156 380 aaPredicted RBP19.88■□□□□ 0.77
COL9A3-204ENST00000463487 IFNB1P01574 187 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 EPOP01588 193 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 TRBC1P01850 177 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 SYPP08247 313 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 PDHA1P08559 390 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 ZNF30P17039 623 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 LIG3P49916 1009 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 PAPD7Q5XG87 772 aaKnown RBP19.88■□□□□ 0.77
COL9A3-204ENST00000463487 SLC23A3Q6PIS1 610 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 GSTA5Q7RTV2 222 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 DENND6BQ8NEG7 585 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 PIH1D2Q8WWB5 315 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 TADA1Q96BN2 335 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 RTP4Q96DX8 246 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 MCCC1Q96RQ3 725 aaPredicted RBP19.88■□□□□ 0.77
COL9A3-204ENST00000463487 MLPHQ9BV36 600 aaPredicted RBP19.88■□□□□ 0.77
COL9A3-204ENST00000463487 C1QTNF2Q9BXJ5 285 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 ZDHHC5Q9C0B5 715 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 B4GALT6Q9UBX8 382 aa19.88■□□□□ 0.77
COL9A3-204ENST00000463487 DRG1Q9Y295 367 aaKnown RBP19.88■□□□□ 0.77
COL9A3-204ENST00000463487 RALGAPA1Q6GYQ0 2036 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 TRPM6Q9BX84 2022 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 CAPN8A6NHC0 703 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 ANKRD66B4E2M5 251 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 PSMD11O00231 422 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 NDST3O95803 873 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 PRKCGP05129 697 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 C6P13671 934 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 CD38P28907 300 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 CASQ1P31415 396 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 WNT3AP56704 352 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 C21orf59P57076 290 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 ETF1P62495 437 aaKnown RBP19.87■□□□□ 0.77
COL9A3-204ENST00000463487 OVGP1Q12889 678 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 SIX1Q15475 284 aaPredicted RBP19.87■□□□□ 0.77
COL9A3-204ENST00000463487 CCDC6Q16204 474 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 PARP6Q2NL67 630 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 C4orf22Q6V702 233 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 IQCHQ86VS3 1027 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 COG1Q8WTW3 980 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 KLK6Q92876 244 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 MS4A14Q96JA4 679 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 LENG8Q96PV6 779 aaPredicted RBP19.87■□□□□ 0.77
COL9A3-204ENST00000463487 UBP1Q9NZI7 540 aa19.87■□□□□ 0.77
COL9A3-204ENST00000463487 FPGTO14772 594 aa19.86■□□□□ 0.77
COL9A3-204ENST00000463487 PSMD3O43242 534 aa19.86■□□□□ 0.77
COL9A3-204ENST00000463487 PAK4O96013 591 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-204ENST00000463487 CTPS1P17812 591 aa19.86■□□□□ 0.77
COL9A3-204ENST00000463487 ITIH2P19823 946 aa19.86■□□□□ 0.77
COL9A3-204ENST00000463487 HLA-DPA1P20036 260 aa19.86■□□□□ 0.77
COL9A3-204ENST00000463487 PSMB4P28070 264 aa19.86■□□□□ 0.77
COL9A3-204ENST00000463487 PAFAH1B1P43034 410 aa19.86■□□□□ 0.77
COL9A3-204ENST00000463487 ATXN3P54252 364 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-204ENST00000463487 IL27RAQ6UWB1 636 aa19.86■□□□□ 0.77
COL9A3-204ENST00000463487 LIPIQ6XZB0 460 aa19.86■□□□□ 0.77
COL9A3-204ENST00000463487 PRR23CQ6ZRP0 262 aa19.86■□□□□ 0.77
COL9A3-204ENST00000463487 KDELC2Q7Z4H8 507 aa19.86■□□□□ 0.77
COL9A3-204ENST00000463487 MFSD2AQ8NA29 543 aa19.86■□□□□ 0.77
COL9A3-204ENST00000463487 IPMKQ8NFU5 416 aa19.86■□□□□ 0.77
COL9A3-204ENST00000463487 CCHCR1Q8TD31 782 aa19.86■□□□□ 0.77
COL9A3-204ENST00000463487 SLC6A18Q96N87 628 aa19.86■□□□□ 0.77
COL9A3-204ENST00000463487 RNF14Q9UBS8 474 aa19.86■□□□□ 0.77
COL9A3-204ENST00000463487 FEZ2Q9UHY8 353 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-204ENST00000463487 GPR179Q6PRD1 2367 aa19.85■□□□□ 0.77
COL9A3-204ENST00000463487 NPIPB15A6NHN6 443 aaPredicted RBP19.85■□□□□ 0.77
COL9A3-204ENST00000463487 F5H423 210 aaPredicted RBP19.85■□□□□ 0.77
COL9A3-204ENST00000463487 HEXIM1O94992 359 aaKnown RBP19.85■□□□□ 0.77
COL9A3-204ENST00000463487 PRLP01236 227 aa19.85■□□□□ 0.77
COL9A3-204ENST00000463487 ALPIP09923 528 aa19.85■□□□□ 0.77
COL9A3-204ENST00000463487 GDF10P55107 478 aa19.85■□□□□ 0.77
COL9A3-204ENST00000463487 RALGDSQ12967 914 aa19.85■□□□□ 0.77
COL9A3-204ENST00000463487 GALNT3Q14435 633 aa19.85■□□□□ 0.77
COL9A3-204ENST00000463487 LRRC14Q15048 493 aa19.85■□□□□ 0.77
COL9A3-204ENST00000463487 ACOX1Q15067 660 aa19.85■□□□□ 0.77
COL9A3-204ENST00000463487 AASDHQ4L235 1098 aaPredicted RBP19.85■□□□□ 0.77
COL9A3-204ENST00000463487 KDELC1Q6UW63 502 aa19.85■□□□□ 0.77
COL9A3-204ENST00000463487 C17orf53Q8N3J3 647 aaPredicted RBP19.85■□□□□ 0.77
COL9A3-204ENST00000463487 DCLK2Q8N568 766 aa19.85■□□□□ 0.77
COL9A3-204ENST00000463487 C1orf216Q8TAB5 229 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms