RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 ZSWIM9Q86XI8 627 aa20.87■□□□□ 0.93
CPSF7-209ENST00000463244 SLITRK4Q8IW52 837 aa20.87■□□□□ 0.93
CPSF7-209ENST00000463244 UMODL1-AS1Q8N2C9 162 aa20.87■□□□□ 0.93
CPSF7-209ENST00000463244 FAM46DQ8NEK8 389 aa20.87■□□□□ 0.93
CPSF7-209ENST00000463244 OR1E3Q8WZA6 343 aa20.87■□□□□ 0.93
CPSF7-209ENST00000463244 ZNF641Q96N77 438 aaPredicted RBP20.87■□□□□ 0.93
CPSF7-209ENST00000463244 CMKLR1Q99788 373 aa20.87■□□□□ 0.93
CPSF7-209ENST00000463244 GANQ9H2C0 597 aa20.87■□□□□ 0.93
CPSF7-209ENST00000463244 FGF22Q9HCT0 170 aa20.87■□□□□ 0.93
CPSF7-209ENST00000463244 FOXJ2Q9P0K8 574 aa20.87■□□□□ 0.93
CPSF7-209ENST00000463244 UBA2Q9UBT2 640 aaPredicted RBP20.87■□□□□ 0.93
CPSF7-209ENST00000463244 ATP8A1Q9Y2Q0 1164 aa20.87■□□□□ 0.93
CPSF7-209ENST00000463244 PCDHGA4Q9Y5G9 962 aa20.87■□□□□ 0.93
CPSF7-209ENST00000463244 RNF215Q9Y6U7 377 aa20.87■□□□□ 0.93
CPSF7-209ENST00000463244 NBASA2RRP1 2371 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 TMEM202A6NGA9 273 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 BUB1BO60566 1050 aaPredicted RBP20.86■□□□□ 0.93
CPSF7-209ENST00000463244 FAM87AP0C7U9 286 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 UNGP13051 313 aaPredicted RBP20.86■□□□□ 0.93
CPSF7-209ENST00000463244 ERCC5P28715 1186 aaPredicted RBP20.86■□□□□ 0.93
CPSF7-209ENST00000463244 KIAA1024LP59773 190 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 NFKB2Q00653 900 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 HLTFQ14527 1009 aaKnown RBP eCLIP20.86■□□□□ 0.93
CPSF7-209ENST00000463244 C14orf28Q4W4Y0 310 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 CFAP58Q5T655 872 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 TRIM72Q6ZMU5 477 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 TMPRSS9Q7Z410 1059 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 TAF8Q7Z7C8 310 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 VASH2Q86V25 355 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 ZFAND4Q86XD8 727 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 DTX1Q86Y01 620 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 SFTPA2Q8IWL1 248 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 OR56A4Q8NGH8 313 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 FUBP1Q96AE4 644 aaKnown RBP20.86■□□□□ 0.93
CPSF7-209ENST00000463244 SEMA3CQ99985 751 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 CATSPERBQ9H7T0 1116 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 PDFQ9HBH1 243 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 SDK2Q58EX2 2172 aa20.86■□□□□ 0.93
CPSF7-209ENST00000463244 A0A1W2PQC6 194 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 CFAP69A5D8W1 941 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 C9orf172C9J069 976 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 AGRPO00253 132 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 CACNB4O00305 520 aaPredicted RBP20.85■□□□□ 0.93
CPSF7-209ENST00000463244 CREB3O43889 395 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 PRKCGP05129 697 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 SFTPCP11686 197 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 JAM2P57087 298 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 ATG14Q6ZNE5 492 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 CAMK1DQ8IU85 385 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 ZSCAN1Q8NBB4 408 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 C3orf20Q8ND61 904 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 USP7Q93009 1102 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 TUBGCP5Q96RT8 1024 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 PCDHB18PQ96TA0 734 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 SELENOOQ9BVL4 669 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 TMEM168Q9H0V1 697 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 MRPL40Q9NQ50 206 aaKnown RBP20.85■□□□□ 0.93
CPSF7-209ENST00000463244 SAMSN1Q9NSI8 373 aaKnown RBP20.85■□□□□ 0.93
CPSF7-209ENST00000463244 ADAM22Q9P0K1 906 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 LRIT1Q9P2V4 623 aa20.85■□□□□ 0.93
CPSF7-209ENST00000463244 B4DGG1 531 aa20.84■□□□□ 0.93
CPSF7-209ENST00000463244 TNFRSF10CO14798 259 aa20.84■□□□□ 0.93
CPSF7-209ENST00000463244 CCP110O43303 1012 aa20.84■□□□□ 0.93
CPSF7-209ENST00000463244 SUV39H1O43463 412 aa20.84■□□□□ 0.93
CPSF7-209ENST00000463244 NUDT21O43809 227 aaKnown RBP20.84■□□□□ 0.93
CPSF7-209ENST00000463244 RECQL5O94762 991 aaPredicted RBP20.84■□□□□ 0.93
CPSF7-209ENST00000463244 HOXC4P09017 264 aaPredicted RBP20.84■□□□□ 0.93
CPSF7-209ENST00000463244 WT1P19544 449 aaPredicted RBP20.84■□□□□ 0.93
CPSF7-209ENST00000463244 CD82P27701 267 aa20.84■□□□□ 0.93
CPSF7-209ENST00000463244 SOX5P35711 763 aa20.84■□□□□ 0.93
CPSF7-209ENST00000463244 NSFP46459 744 aaKnown RBP20.84■□□□□ 0.93
CPSF7-209ENST00000463244 MAPK10P53779 464 aa20.84■□□□□ 0.93
CPSF7-209ENST00000463244 RALGDSQ12967 914 aa20.84■□□□□ 0.93
CPSF7-209ENST00000463244 ARHGEF7Q14155 803 aa20.84■□□□□ 0.93
CPSF7-209ENST00000463244 TBR1Q16650 682 aa20.84■□□□□ 0.93
CPSF7-209ENST00000463244 TCP11X2Q5H9J9 407 aa20.84■□□□□ 0.93
CPSF7-209ENST00000463244 SCYL2Q6P3W7 929 aa20.84■□□□□ 0.93
CPSF7-209ENST00000463244 LRRC19Q9H756 370 aa20.84■□□□□ 0.93
CPSF7-209ENST00000463244 FZD10Q9ULW2 581 aa20.84■□□□□ 0.93
CPSF7-209ENST00000463244 PCDHB11Q9Y5F2 797 aa20.84■□□□□ 0.93
CPSF7-209ENST00000463244 SIGLEC16A6NMB1 481 aa20.83■□□□□ 0.93
CPSF7-209ENST00000463244 J3KR12 359 aa20.83■□□□□ 0.93
CPSF7-209ENST00000463244 FGF10O15520 208 aaPredicted RBP20.83■□□□□ 0.93
CPSF7-209ENST00000463244 PRAMEF11O60813 436 aa20.83■□□□□ 0.93
CPSF7-209ENST00000463244 KELP23276 732 aa20.83■□□□□ 0.93
CPSF7-209ENST00000463244 EEF1GP26641 437 aaKnown RBP20.83■□□□□ 0.93
CPSF7-209ENST00000463244 TRIM23P36406 574 aa20.83■□□□□ 0.93
CPSF7-209ENST00000463244 RGRP47804 291 aa20.83■□□□□ 0.93
CPSF7-209ENST00000463244 ZNF143P52747 638 aaPredicted RBP20.83■□□□□ 0.93
CPSF7-209ENST00000463244 AIF1P55008 147 aa20.83■□□□□ 0.93
CPSF7-209ENST00000463244 POLR2FP61218 127 aaKnown RBP20.83■□□□□ 0.93
CPSF7-209ENST00000463244 B4GALNT1Q00973 533 aa20.83■□□□□ 0.93
CPSF7-209ENST00000463244 PHF19Q5T6S3 580 aa20.83■□□□□ 0.93
CPSF7-209ENST00000463244 SPECC1LQ69YQ0 1117 aa20.83■□□□□ 0.93
CPSF7-209ENST00000463244 PHF13Q86YI8 300 aaPredicted RBP20.83■□□□□ 0.93
CPSF7-209ENST00000463244 HTR3CQ8WXA8 447 aa20.83■□□□□ 0.93
CPSF7-209ENST00000463244 B3GNT4Q9C0J1 378 aa20.83■□□□□ 0.93
CPSF7-209ENST00000463244 SEMA6CQ9H3T2 930 aa20.83■□□□□ 0.93
CPSF7-209ENST00000463244 DPEP2Q9H4A9 486 aa20.83■□□□□ 0.93
CPSF7-209ENST00000463244 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms