RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 MAMLD1Q13495 774 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 GTF2H3Q13889 308 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 ZNF268Q14587 947 aaPredicted RBP7.62□□□□□ -1.19
UBE4B-204ENST00000462658 MESDQ14696 234 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 UBXN2BQ14CS0 331 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 RPS6KA1Q15418 735 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 PTPN20Q4JDL3 420 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 PLEKHA7Q6IQ23 1121 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 CXorf57Q6NSI4 855 aaKnown RBP7.62□□□□□ -1.19
UBE4B-204ENST00000462658 C11orf63Q6NUN7 778 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 DRICH1Q6PGQ1 229 aaPredicted RBP7.62□□□□□ -1.19
UBE4B-204ENST00000462658 MED25Q71SY5 747 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 C14orf80Q86SX3 495 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 NT5DC3Q86UY8 548 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 TTC30AQ86WT1 665 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 THEM5Q8N1Q8 247 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 ANKRD52Q8NB46 1076 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 B3GALNT2Q8NCR0 500 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 C3orf20Q8ND61 904 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 PPP1R35Q8TAP8 253 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 C18orf8Q96DM3 657 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 TAAR9Q96RI9 348 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 CPXM1Q96SM3 734 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 HNRNPABQ99729 332 aaKnown RBP7.62□□□□□ -1.19
UBE4B-204ENST00000462658 SYT15Q9BQS2 421 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 COLEC11Q9BWP8 271 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 TLR10Q9BXR5 811 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 MIS12Q9H081 205 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 GOLPH3Q9H4A6 298 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 SYNCQ9H7C4 482 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 CALCOCO1Q9P1Z2 691 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 WDR35Q9P2L0 1181 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 EIF2B4Q9UI10 523 aaKnown RBP7.62□□□□□ -1.19
UBE4B-204ENST00000462658 CDC23Q9UJX2 597 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 AMFRQ9UKV5 643 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 CDH9Q9ULB4 789 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 SNX12Q9UMY4 172 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 PACSIN2Q9UNF0 486 aaPredicted RBP7.62□□□□□ -1.19
UBE4B-204ENST00000462658 PRG3Q9Y2Y8 225 aaPredicted RBP7.62□□□□□ -1.19
UBE4B-204ENST00000462658 HYOU1Q9Y4L1 999 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 ALG6Q9Y672 507 aa7.62□□□□□ -1.19
UBE4B-204ENST00000462658 SCN5AQ14524 2016 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 TCRBV5S1A1TA0A578 114 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 GRXCR1A8MXD5 290 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 GOLGA8SH3BPF8 625 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 MYO1FO00160 1098 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 SRGAP2O75044 1071 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 PRSS23O95084 383 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 SLU7O95391 586 aaKnown RBP7.61□□□□□ -1.19
UBE4B-204ENST00000462658 AMHP03971 560 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 ERBB2P04626 1255 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 GALTP07902 379 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 TCP1P17987 556 aaKnown RBP7.61□□□□□ -1.19
UBE4B-204ENST00000462658 SLC6A4P31645 630 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 SLC11A1P49279 550 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 RGS7P49802 495 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 BCAT1P54687 386 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 SNX16P57768 344 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 RNASE9P60153 205 aaKnown RBP7.61□□□□□ -1.19
UBE4B-204ENST00000462658 TAP1Q03518 808 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 BST2Q10589 180 aaKnown RBP7.61□□□□□ -1.19
UBE4B-204ENST00000462658 PDCLQ13371 301 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 WHAMMP3Q1A5X7 153 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 MDH1BQ5I0G3 518 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 CYP4A22Q5TCH4 519 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 METRNLQ641Q3 311 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 NXNQ6DKJ4 435 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 PMF1Q6P1K2 205 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 DNAJC24Q6P3W2 148 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 LRRC43Q8N309 656 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 SH2D3CQ8N5H7 860 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 SLC2A14Q8TDB8 520 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 IPO4Q8TEX9 1081 aaKnown RBP7.61□□□□□ -1.19
UBE4B-204ENST00000462658 SLC35F5Q8WV83 523 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 TOP1MTQ969P6 601 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 OSBPL9Q96SU4 736 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 NEU1Q99519 415 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 GDF15Q99988 308 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 RTP3Q9BQQ7 232 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 ACBD6Q9BR61 282 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 TMEM175Q9BSA9 504 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 MED10Q9BTT4 135 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 SELENOOQ9BVL4 669 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 CARD6Q9BX69 1037 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 TRIM7Q9C029 511 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 GSTO2Q9H4Y5 243 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 ANAPC7Q9UJX3 599 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 ADAM28Q9UKQ2 775 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 NR2E3Q9Y5X4 410 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 TET1Q8NFU7 2136 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 COL6A3P12111 3177 aa7.61□□□□□ -1.19
UBE4B-204ENST00000462658 CHD9Q3L8U1 2897 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 MYBPHLA2RUH7 354 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 TMEM191CA6NGB0 347 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 SIGLEC16A6NMB1 481 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 MIF4GDA9UHW6 222 aaKnown RBP7.6□□□□□ -1.19
UBE4B-204ENST00000462658 NT5C1B-RDH14C9J2C7 533 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 E5RJQ4 531 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 TULP2O00295 520 aa7.6□□□□□ -1.19
UBE4B-204ENST00000462658 CLDN5O00501 218 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms