RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 COQ6Q9Y2Z9 468 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 PCDHGC4Q9Y5F7 938 aa15.48■□□□□ 0.07
VARS-219ENST00000461328 NEMP2A6NFY4 417 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 ZNF487B1APH4 448 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 RIOK3O14730 519 aaKnown RBP15.47■□□□□ 0.07
VARS-219ENST00000461328 MATN3O15232 486 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 CSF2P04141 144 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 ELFN1P0C7U0 828 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 NME1P15531 152 aaKnown RBP15.47■□□□□ 0.07
VARS-219ENST00000461328 FECHP22830 423 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 CCNCP24863 283 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 LIG3P49916 1009 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 DAB2P98082 770 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 ILKQ13418 452 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 RALGPS1Q5JS13 557 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 C11orf63Q6NUN7 778 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 RAD9BQ6WBX8 426 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 DAAM2Q86T65 1068 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 TMPRSS12Q86WS5 348 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 MARCH9Q86YJ5 346 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 CCDC50Q8IVM0 306 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 CCDC13Q8IYE1 715 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 TP53I13Q8NBR0 393 aaPredicted RBP15.47■□□□□ 0.07
VARS-219ENST00000461328 ACRBPQ8NEB7 543 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 OR4C6Q8NH72 309 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 LRRN4Q8WUT4 740 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 HDAC11Q96DB2 347 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 ECHDC3Q96DC8 303 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 SEMA3CQ99985 751 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 RBM22Q9NW64 420 aaKnown RBP eCLIP15.47■□□□□ 0.07
VARS-219ENST00000461328 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.47■□□□□ 0.07
VARS-219ENST00000461328 ALG6Q9Y672 507 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 PTPRBP23467 1997 aa15.47■□□□□ 0.07
VARS-219ENST00000461328 IGF2RP11717 2491 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 A0A1W2PQ67 120 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 C3orf70A6NLC5 250 aaPredicted RBP15.46■□□□□ 0.07
VARS-219ENST00000461328 TRAFD1O14545 582 aaPredicted RBP15.46■□□□□ 0.07
VARS-219ENST00000461328 PPP1R12AO14974 1030 aaPredicted RBP15.46■□□□□ 0.07
VARS-219ENST00000461328 CCNB1P14635 433 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 JUNDP17535 347 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 CR2P20023 1033 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 HNF1BP35680 557 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 AP1B1Q10567 949 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 TRAF2Q12933 501 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 LRRC14Q15048 493 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 IRF4Q15306 451 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 TPRG1LQ5T0D9 272 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 ARMC12Q5T9G4 340 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 KAZNQ674X7 775 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 SLC9A4Q6AI14 798 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 MFSD7Q6UXD7 560 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 DPPA4Q7L190 304 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 TEX26Q8N6G2 289 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 PLD5Q8N7P1 536 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 ZNF548Q8NEK5 533 aaPredicted RBP15.46■□□□□ 0.07
VARS-219ENST00000461328 MAML1Q92585 1016 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 TSGA13Q96PP4 275 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 CCDC86Q9H6F5 360 aaKnown RBP15.46■□□□□ 0.07
VARS-219ENST00000461328 MBNL1Q9NR56 388 aaKnown RBP15.46■□□□□ 0.07
VARS-219ENST00000461328 NLGN3Q9NZ94 848 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 SEPT10Q9P0V9 454 aa15.46■□□□□ 0.07
VARS-219ENST00000461328 SHROOM3Q8TF72 1996 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 A8MX80 341 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 KCNK1O00180 336 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 TOR1BO14657 336 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 SCAMP1O15126 338 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 HTRA2O43464 458 aaPredicted RBP15.45■□□□□ 0.06
VARS-219ENST00000461328 PCCBP05166 539 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 HLA-DQB2P05538 268 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 JUPP14923 745 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 CA4P22748 312 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 ACP1P24666 158 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 VAV2P52735 878 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 CLDN6P56747 220 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 YPEL5P62699 121 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 DSC2Q02487 901 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 SLC10A2Q12908 348 aaPredicted RBP15.45■□□□□ 0.06
VARS-219ENST00000461328 EIF2B5Q13144 721 aaKnown RBP15.45■□□□□ 0.06
VARS-219ENST00000461328 TFDP2Q14188 446 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 PDK1Q15118 436 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 LLGL1Q15334 1064 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 NPNTQ6UXI9 565 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 USP45Q70EL2 814 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 TXLNBQ8N3L3 684 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 TPCN2Q8NHX9 752 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 BTN2A2Q8WVV5 523 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 LGMNQ99538 433 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 DUSP23Q9BVJ7 150 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 B4GALT6Q9UBX8 382 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 RAI2Q9Y5P3 530 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 PLXNB3Q9ULL4 1909 aa15.45■□□□□ 0.06
VARS-219ENST00000461328 SPEGQ15772 3267 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 K7ESM1 405 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 AQP9O43315 295 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 PGLSO95336 258 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 JCHAINP01591 159 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 GIMD1P0DJR0 217 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 CYP2A6P11509 494 aaPredicted RBP15.44■□□□□ 0.06
VARS-219ENST00000461328 KRT10P13645 584 aa15.44■□□□□ 0.06
VARS-219ENST00000461328 CDKN2BP42772 138 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms