RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 ALDH7A1P49419 539 aaKnown RBP3.94□□□□□ -1.78
CLK1-206ENST00000461326 RASSF2P50749 326 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 CDH8P55286 799 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 GAD2Q05329 585 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 LRMPQ12912 555 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 FRG1Q14331 258 aaKnown RBP3.94□□□□□ -1.78
CLK1-206ENST00000461326 DRAP1Q14919 205 aaPredicted RBP3.94□□□□□ -1.78
CLK1-206ENST00000461326 TRIP6Q15654 476 aaKnown RBP3.94□□□□□ -1.78
CLK1-206ENST00000461326 INPP5JQ15735 1006 aaPredicted RBP3.94□□□□□ -1.78
CLK1-206ENST00000461326 ADIPOQQ15848 244 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 HSPB2Q16082 182 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 PCGF3Q3KNV8 242 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 USP41Q3LFD5 358 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 ZNF260Q3ZCT1 412 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 C10orf25Q5T742 122 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 GLDNQ6ZMI3 551 aaPredicted RBP3.94□□□□□ -1.78
CLK1-206ENST00000461326 TRILQ7L0X0 811 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 ZDHHC17Q8IUH5 632 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 CNGA4Q8IV77 575 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 FAM217AQ8IXS0 508 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 TEX11Q8IYF3 940 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 OR8H2Q8N162 312 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 ZCCHC9Q8N567 271 aaKnown RBP3.94□□□□□ -1.78
CLK1-206ENST00000461326 GJC3Q8NFK1 279 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 PRSS3P2Q8NHM4 247 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 EME1Q96AY2 570 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 MOAP1Q96BY2 351 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 CALML4Q96GE6 196 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 C1orf74Q96LT6 269 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 NUF2Q9BZD4 464 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 GLIS2Q9BZE0 524 aaPredicted RBP3.94□□□□□ -1.78
CLK1-206ENST00000461326 AAMDCQ9H7C9 122 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 MVB12BQ9H7P6 319 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 ELOVL5Q9NYP7 299 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 PLK2Q9NYY3 685 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 ZNF215Q9UL58 517 aaPredicted RBP3.94□□□□□ -1.78
CLK1-206ENST00000461326 LRP12Q9Y561 859 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 A3GALT2U3KPV4 340 aa3.94□□□□□ -1.78
CLK1-206ENST00000461326 FRMD3A2A2Y4 597 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 ZC3H11AO75152 810 aaKnown RBP eCLIP3.93□□□□□ -1.78
CLK1-206ENST00000461326 ATP2C2O75185 946 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 DAB1O75553 588 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 NDUFB4O95168 129 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 CLDN7O95471 211 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 TFPIP10646 304 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 ACTN1P12814 892 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 AGAP20933 346 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 MCM3P25205 808 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 MPGP29372 298 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 AVPR1AP37288 418 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 HADHAP40939 763 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 MMP13P45452 471 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 RAD23BP54727 409 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 CDH12P55289 794 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 SNX16P57768 344 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 ST3GAL1Q11201 340 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 ITGADQ13349 1161 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 ALG11Q2TAA5 492 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 SOWAHCQ53LP3 525 aaPredicted RBP3.93□□□□□ -1.78
CLK1-206ENST00000461326 MFSD4BQ5TF39 518 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 ASPHD1Q5U4P2 390 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 JADE1Q6IE81 842 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 CHST9Q7L1S5 443 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 ENOSF1Q7L5Y1 443 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 LINGO2Q7L985 606 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 GALNT5Q7Z7M9 940 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 PRPF39Q86UA1 669 aaKnown RBP3.93□□□□□ -1.78
CLK1-206ENST00000461326 LURAP1LQ8IV03 231 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 DHX40Q8IX18 779 aaKnown RBP3.93□□□□□ -1.78
CLK1-206ENST00000461326 RNF168Q8IYW5 571 aaPredicted RBP3.93□□□□□ -1.78
CLK1-206ENST00000461326 LSMEM1Q8N8F7 131 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 TEX45Q8NA69 505 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 SCCPDHQ8NBX0 429 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 SMRP1Q8NCR6 262 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 SLC35F5Q8WV83 523 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 JAKMIP2Q96AA8 810 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 TMEM18Q96B42 140 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 COQ8BQ96D53 544 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 VCPIP1Q96JH7 1222 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 HARBI1Q96MB7 349 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 YME1L1Q96TA2 773 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 TMEM47Q9BQJ4 181 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 C1QTNF1Q9BXJ1 281 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 TEX12Q9BXU0 123 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 FTOQ9C0B1 505 aaKnown RBP eCLIP3.93□□□□□ -1.78
CLK1-206ENST00000461326 VPS33BQ9H267 617 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 KIF9Q9HAQ2 790 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 MAGEE1Q9HCI5 957 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 FZD3Q9NPG1 666 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 PLSCR4Q9NRQ2 329 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 DECR2Q9NUI1 292 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 TMEM184CQ9NVA4 438 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 MSRB1Q9NZV6 116 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 MORF4L1Q9UBU8 362 aa3.93□□□□□ -1.78
CLK1-206ENST00000461326 SRPRBQ9Y5M8 271 aaKnown RBP3.93□□□□□ -1.78
CLK1-206ENST00000461326 PLOD3O60568 738 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 CSPG5O95196 566 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 OR2C1O95371 312 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 RB1P06400 928 aa3.92□□□□□ -1.78
CLK1-206ENST00000461326 MMP2P08253 660 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms