RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 TSEN34Q9BSV6 310 aaKnown RBP6.23□□□□□ -1.41
VPS13D-202ENST00000460333 DUSP16Q9BY84 665 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 CDV3Q9UKY7 258 aaKnown RBP6.23□□□□□ -1.41
VPS13D-202ENST00000460333 PCDHA11Q9Y5I1 949 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 WDR90Q96KV7 1748 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 DHRS12A0PJE2 317 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 E5RI56 91 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 ANXA9O76027 345 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 URODP06132 367 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 AMPD1P23109 780 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 CRHR1P34998 444 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 GPD2P43304 727 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 TRIM32Q13049 653 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 DPYSL3Q14195 570 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 ATP6AP1LQ52LC2 224 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 CCNYL2Q5T2Q4 361 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 C6orf52Q5T4I8 152 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 CACHD1Q5VU97 1274 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 AADACL2Q6P093 401 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 FBXO46Q6PJ61 603 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-202ENST00000460333 DCLRE1AQ6PJP8 1040 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 POTEHQ6S545 545 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 CYP2R1Q6VVX0 501 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 FAM228AQ86W67 206 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 SCN4BQ8IWT1 228 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 UBR7Q8N806 425 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 RTL3Q8N8U3 475 aaKnown RBP6.23□□□□□ -1.41
VPS13D-202ENST00000460333 OR6P1Q8NGX9 317 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 MCFD2Q8NI22 146 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 SKA2Q8WVK7 121 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-202ENST00000460333 DNAJC1Q96KC8 554 aaKnown RBP6.23□□□□□ -1.41
VPS13D-202ENST00000460333 TRIM8Q9BZR9 551 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 MAPRE3Q9UPY8 281 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 PLLPQ9Y342 182 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 ASB3Q9Y575 518 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 V9GYQ6 96 aa6.23□□□□□ -1.41
VPS13D-202ENST00000460333 HACD1B0YJ81 288 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 LOC110117498-PIK3R3F6TDL0 507 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 H7C4K7 107 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 FAM189A1O60320 539 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 PRLP01236 227 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 CD52P31358 61 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 NOS2P35228 1153 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 GSSP48637 474 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 CD97P48960 835 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 SCNN1GP51170 649 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 TKTL1P51854 596 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 TPTEP56180 551 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 LILRA4P59901 499 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 KLF10Q13118 480 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 GTF2H3Q13889 308 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 TSNQ15631 228 aaKnown RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 ARHGAP15Q53QZ3 475 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 OTUD3Q5T2D3 398 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 WSCD1Q658N2 575 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 OVOS1Q6IE37 1185 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 PROSER1Q86XN7 944 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 SCUBE3Q8IX30 993 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 ZNF276Q8N554 614 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 SLC44A1Q8WWI5 657 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 PIK3R3Q92569 461 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 TP53INP1Q96A56 240 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 HNRNPABQ99729 332 aaKnown RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 THUMPD3Q9BV44 507 aaKnown RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 TRIM54Q9BYV2 358 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 NMRAL1Q9HBL8 299 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 POLG2Q9UHN1 485 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 GJD2Q9UKL4 321 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 PADI3Q9ULW8 664 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 AP4E1Q9UPM8 1137 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 VPS9D1Q9Y2B5 631 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 A0A087X1B8 175 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 CASTOR2A6NHX0 329 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 SUPT3HB4E1H0 165 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 M0QYT0 321 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 EEF2KO00418 725 aaKnown RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 NOS1APO75052 506 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 IQCF3P0C7M6 154 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 FGFR3P22607 806 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 HOXA11P31270 313 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 AKT1P31749 480 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 OR1G1P47890 313 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 MAPK10P53779 464 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 AIF1P55008 147 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 PHC1P78364 1004 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 SCRN3Q0VDG4 424 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 TUSC3Q13454 348 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 FUT11Q495W5 492 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 TJAP1Q5JTD0 557 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 DCAF12L1Q5VU92 463 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 ZCCHC23Q6ZST2 131 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 PGBD3Q8N328 593 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 ITFG1Q8TB96 612 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 SLC7A14Q8TBB6 771 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 MAGEE2Q8TD90 523 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 RNF145Q96MT1 663 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 HOPXQ9BPY8 73 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 MRPL9Q9BYD2 267 aaKnown RBP6.22□□□□□ -1.41
VPS13D-202ENST00000460333 POPDC2Q9HBU9 364 aa6.22□□□□□ -1.41
VPS13D-202ENST00000460333 FBXL21Q9UKT6 434 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms