RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 REXO2Q9Y3B8 237 aaKnown RBP15.04■□□□□ -0
ATG4B-213ENST00000460211 GPSM3Q9Y4H4 160 aa15.04■□□□□ -0
ATG4B-213ENST00000460211 TTLL3Q9Y4R7 772 aa15.04■□□□□ -0
ATG4B-213ENST00000460211 PCDHGC4Q9Y5F7 938 aa15.04■□□□□ -0
ATG4B-213ENST00000460211 TTC24A2A3L6 582 aaPredicted RBP15.03■□□□□ -0
ATG4B-213ENST00000460211 RCCD1A6NED2 376 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 TOR1BO14657 336 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 PJA2O43164 708 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 SPINT1O43278 529 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 HTRA2O43464 458 aaPredicted RBP15.03■□□□□ -0
ATG4B-213ENST00000460211 MMP12P39900 470 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 CDKN2BP42772 138 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 LIG3P49916 1009 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 IL9RQ01113 521 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 PPIDQ08752 370 aaKnown RBP15.03■□□□□ -0
ATG4B-213ENST00000460211 AP1B1Q10567 949 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 LRRC14Q15048 493 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 COL28A1Q2UY09 1125 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 KAZNQ674X7 775 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 SPOCD1Q6ZMY3 1216 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 GCNT7Q6ZNI0 430 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 SPATS2Q86XZ4 545 aaKnown RBP15.03■□□□□ -0
ATG4B-213ENST00000460211 TMEM139Q8IV31 216 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 SYCE1Q8N0S2 351 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 OR13H1Q8NG92 308 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 EXD1Q8NHP7 514 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 SPOCK2Q92563 424 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 IFT43Q96FT9 208 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 BMFQ96LC9 184 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 LGMNQ99538 433 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 LACRTQ9GZZ8 138 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 PCOLCE2Q9UKZ9 415 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 DUSP10Q9Y6W6 482 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 PLXNB3Q9ULL4 1909 aa15.03■□□□□ -0
ATG4B-213ENST00000460211 CCDC66A2RUB6 948 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 POM121BA6NF01 834 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 RAD51BO15315 384 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 NRDCO43847 1150 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 CST8O60676 142 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 CPP00450 1065 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 JCHAINP01591 159 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 ELFN1P0C7U0 828 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 CYP2A6P11509 494 aaPredicted RBP15.02■□□□□ -0
ATG4B-213ENST00000460211 C6P13671 934 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 TGM2P21980 687 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 COPS2P61201 443 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 PTK2BQ14289 1009 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 TAZQ16635 292 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 PDZD3Q86UT5 571 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 ZSWIM9Q86XI8 627 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 CCDC112Q8NEF3 446 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 MDM1Q8TC05 714 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 ADAMTS14Q8WXS8 1223 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 P3H4Q92791 437 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 CENPTQ96BT3 561 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 KLF6Q99612 283 aaPredicted RBP15.02■□□□□ -0
ATG4B-213ENST00000460211 SALL4Q9UJQ4 1053 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 PCDHA3Q9Y5H8 950 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 RAI2Q9Y5P3 530 aa15.02■□□□□ -0
ATG4B-213ENST00000460211 PLXNA2O75051 1894 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 LOC400499M0QZD8 3231 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 KCNK1O00180 336 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 PGLSO95336 258 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 PRKCGP05129 697 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 EPHA8P29322 1005 aaPredicted RBP15.01□□□□□ -0.01
ATG4B-213ENST00000460211 CTNNA1P35221 906 aaKnown RBP15.01□□□□□ -0.01
ATG4B-213ENST00000460211 THOP1P52888 689 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 EPHB1P54762 984 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 RWDD2BP57060 319 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 YPEL5P62699 121 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 IFI35P80217 286 aaPredicted RBP15.01□□□□□ -0.01
ATG4B-213ENST00000460211 TRAF2Q12933 501 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 PPP2R5EQ16537 467 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 SOWAHCQ53LP3 525 aaPredicted RBP15.01□□□□□ -0.01
ATG4B-213ENST00000460211 HS1BP3Q53T59 392 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 CCDC181Q5TID7 509 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 ALG1LQ6GMV1 187 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 NPNTQ6UXI9 565 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 USP45Q70EL2 814 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 DPPA4Q7L190 304 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 SLCO6A1Q86UG4 719 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.01□□□□□ -0.01
ATG4B-213ENST00000460211 SAP25Q8TEE9 199 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 HNRNPLLQ8WVV9 542 aaKnown RBP15.01□□□□□ -0.01
ATG4B-213ENST00000460211 DESI2Q9BSY9 194 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 TSGA10Q9BZW7 698 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 CCDC86Q9H6F5 360 aaKnown RBP15.01□□□□□ -0.01
ATG4B-213ENST00000460211 KCTD5Q9NXV2 234 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 AMFRQ9UKV5 643 aa15.01□□□□□ -0.01
ATG4B-213ENST00000460211 APOBEC2Q9Y235 224 aaKnown RBP15.01□□□□□ -0.01
ATG4B-213ENST00000460211 PTPRBP23467 1997 aa15□□□□□ -0.01
ATG4B-213ENST00000460211 hCG_1818297A0A087WSY0 165 aa15□□□□□ -0.01
ATG4B-213ENST00000460211 MACROD2A1Z1Q3 448 aa15□□□□□ -0.01
ATG4B-213ENST00000460211 H3BM21 787 aa15□□□□□ -0.01
ATG4B-213ENST00000460211 MTSS1O43312 755 aa15□□□□□ -0.01
ATG4B-213ENST00000460211 CBFA2T3O75081 653 aa15□□□□□ -0.01
ATG4B-213ENST00000460211 HLA-DQB2P05538 268 aa15□□□□□ -0.01
ATG4B-213ENST00000460211 CTNNA2P26232 953 aa15□□□□□ -0.01
ATG4B-213ENST00000460211 VIPR1P32241 457 aa15□□□□□ -0.01
ATG4B-213ENST00000460211 PFN3P60673 137 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms