RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 NEU3Q9UQ49 428 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 PKP3Q9Y446 797 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 SPO11Q9Y5K1 396 aa9.4□□□□□ -0.9
NUDCD3-203ENST00000460110 SRRM3A6NNA2 597 aaPredicted RBP9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 MEI4A8MW99 385 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 B2RBV5 119 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 ALDH1A2O94788 518 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 CRTAMO95727 393 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 SERPINE1P05121 402 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 TFEBP19484 476 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 MPSTP25325 297 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 HOXD9P28356 352 aaPredicted RBP9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 GRIA4P48058 902 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 TSTA3Q13630 321 aaPredicted RBP9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 ARMC12Q5T9G4 340 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 CMTR2Q8IYT2 770 aaKnown RBP9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 EFCAB3Q8N7B9 438 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 OR4L1Q8NH43 312 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 ARRDC2Q8TBH0 407 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 HEXDCQ8WVB3 486 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 GATA5Q9BWX5 397 aaPredicted RBP9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 ADGRE3Q9BY15 652 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 CATSPERZQ9NTU4 200 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 SLCO3A1Q9UIG8 710 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 VWA7Q9Y334 891 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 ATP6AP2A0A1C7CYW4 349 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 IQCF5A8MTL0 148 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 ATP6AP2O75787 350 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 LUC7L3O95232 432 aaKnown RBP9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 C1QAP02745 245 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 UGT2B4P06133 528 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 CA3P07451 260 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 CTSAP10619 480 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 BMP1P13497 986 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 ZXDBP98169 803 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 BCL2L1Q07817 233 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 PEX6Q13608 980 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 FAM219BQ5XKK7 198 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 FAM109BQ6ICB4 259 aaPredicted RBP9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 KDELC1Q6UW63 502 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 TRIM67Q6ZTA4 783 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 LONP2Q86WA8 852 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 TMEM25Q86YD3 366 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 TCEAL8Q8IYN2 117 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 CYB5D2Q8WUJ1 264 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 CDH22Q9UJ99 828 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 LEFTY2O00292 366 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 GRM6O15303 877 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 GPC4O75487 556 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 ZNF189O75820 626 aaPredicted RBP9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 FGF1P05230 155 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 UGT1A6P19224 532 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 UGT1A1P22309 533 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 UGT1A4P22310 534 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 EPHA3P29320 983 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 MC4RP32245 332 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 CD70P32970 193 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 UGT1A3P35503 534 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 UGT1A5P35504 534 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 SERPINB5P36952 375 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 NME5P56597 212 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 HECTD2Q5U5R9 776 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 ZNF781Q8N8C0 355 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 SNX31Q8N9S9 440 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 PIWIL2Q8TC59 973 aaKnown RBP9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 KCNV2Q8TDN2 545 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 PPP1R2P1Q96PQ5 205 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 RAD9AQ99638 391 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 TTLL2Q9BWV7 592 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 KLF16Q9BXK1 252 aaPredicted RBP9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 MTIF3Q9H2K0 278 aaKnown RBP9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 POMKQ9H5K3 350 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 KLC4Q9NSK0 619 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 ARL8BQ9NVJ2 186 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 NSMCE4AQ9NXX6 385 aa9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 ZNF638Q14966 1978 aaKnown RBP9.39□□□□□ -0.91
NUDCD3-203ENST00000460110 ILVBLA1L0T0 632 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 FAM92AA1XBS5 289 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 DRGXA6NNA5 263 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 TMEM233B4DJY2 109 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 SUPT3HB4E1H0 165 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 DCXO43602 365 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 EFCAB14O75071 495 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 SUPT3HO75486 399 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 MPOP05164 745 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 HLA-DPA1P20036 260 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 CTSOP43234 321 aaPredicted RBP9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 RASSF2P50749 326 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 NCALDP61601 193 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 SATB1Q01826 763 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 ARHGAP15Q53QZ3 475 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 TRIM68Q6AZZ1 485 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 PTRHD1Q6GMV3 140 aaKnown RBP9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 C10orf82Q8WW14 230 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 ATP6V1E2Q96A05 226 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 CDKN2AIPNLQ96HQ2 116 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 CRISPLD2Q9H0B8 497 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 ILKAPQ9H0C8 392 aaPredicted RBP9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 SSX2IPQ9Y2D8 614 aa9.38□□□□□ -0.91
NUDCD3-203ENST00000460110 ATG2BQ96BY7 2078 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms