RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 PSMA3P25788 255 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 CCNFP41002 786 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 CCNHP51946 323 aaPredicted RBP24.53■■□□□ 1.52
U2AF1-204ENST00000459639 ZNF140P52738 457 aaPredicted RBP24.53■■□□□ 1.52
U2AF1-204ENST00000459639 PRAMEP78395 509 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 RAD51Q06609 339 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 MPP2Q14168 576 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 GRM2Q14416 872 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 NEPROQ6NW34 567 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 KIAA0408Q6ZU52 694 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 LMNTD2Q8IXW0 634 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 BANPQ8N9N5 519 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 MDGA1Q8NFP4 955 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 CYB5D2Q8WUJ1 264 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 SPOCK2Q92563 424 aa24.53■■□□□ 1.52
U2AF1-204ENST00000459639 C2orf81A6NN90 581 aa24.52■■□□□ 1.52
U2AF1-204ENST00000459639 WASH3PC4AMC7 463 aa24.52■■□□□ 1.52
U2AF1-204ENST00000459639 RPP40O75818 363 aaKnown RBP24.52■■□□□ 1.52
U2AF1-204ENST00000459639 SLC8A1P32418 973 aa24.52■■□□□ 1.52
U2AF1-204ENST00000459639 PDE1BQ01064 536 aa24.52■■□□□ 1.52
U2AF1-204ENST00000459639 PPARDQ03181 441 aa24.52■■□□□ 1.52
U2AF1-204ENST00000459639 EIF4HQ15056 248 aaKnown RBP24.52■■□□□ 1.52
U2AF1-204ENST00000459639 TTC19Q6DKK2 380 aaPredicted RBP24.52■■□□□ 1.52
U2AF1-204ENST00000459639 PARM1Q6UWI2 310 aa24.52■■□□□ 1.52
U2AF1-204ENST00000459639 Q6ZVU0 165 aa24.52■■□□□ 1.52
U2AF1-204ENST00000459639 MTSS1LQ765P7 747 aa24.52■■□□□ 1.52
U2AF1-204ENST00000459639 ANKRD42Q8N9B4 389 aa24.52■■□□□ 1.52
U2AF1-204ENST00000459639 FRS2Q8WU20 508 aa24.52■■□□□ 1.52
U2AF1-204ENST00000459639 ATXN2LQ8WWM7 1075 aaKnown RBP24.52■■□□□ 1.52
U2AF1-204ENST00000459639 FGF14Q92915 247 aa24.52■■□□□ 1.52
U2AF1-204ENST00000459639 PTPRN2Q92932 1015 aa24.52■■□□□ 1.52
U2AF1-204ENST00000459639 VOPP1Q96AW1 172 aa24.52■■□□□ 1.52
U2AF1-204ENST00000459639 SGSM3Q96HU1 749 aa24.52■■□□□ 1.52
U2AF1-204ENST00000459639 APOPT1Q96IL0 206 aa24.52■■□□□ 1.52
U2AF1-204ENST00000459639 DNAJC1Q96KC8 554 aaKnown RBP24.52■■□□□ 1.52
U2AF1-204ENST00000459639 KLF6Q99612 283 aaPredicted RBP24.52■■□□□ 1.52
U2AF1-204ENST00000459639 NLE1Q9NVX2 485 aaPredicted RBP24.52■■□□□ 1.52
U2AF1-204ENST00000459639 GOLGA8RI6L899 631 aa24.51■■□□□ 1.51
U2AF1-204ENST00000459639 PYGBP11216 843 aa24.51■■□□□ 1.51
U2AF1-204ENST00000459639 GKP32189 559 aa24.51■■□□□ 1.51
U2AF1-204ENST00000459639 RECQLP46063 649 aaPredicted RBP24.51■■□□□ 1.51
U2AF1-204ENST00000459639 SLC6A11P48066 632 aa24.51■■□□□ 1.51
U2AF1-204ENST00000459639 ARSDP51689 593 aa24.51■■□□□ 1.51
U2AF1-204ENST00000459639 PTPRNQ16849 979 aa24.51■■□□□ 1.51
U2AF1-204ENST00000459639 ZNF470Q6ECI4 717 aa24.51■■□□□ 1.51
U2AF1-204ENST00000459639 DPY19L3Q6ZPD9 716 aa24.51■■□□□ 1.51
U2AF1-204ENST00000459639 C2CD4AQ8NCU7 369 aaPredicted RBP24.51■■□□□ 1.51
U2AF1-204ENST00000459639 ACMSDQ8TDX5 336 aa24.51■■□□□ 1.51
U2AF1-204ENST00000459639 SORCS1Q8WY21 1168 aa24.51■■□□□ 1.51
U2AF1-204ENST00000459639 HDAC10Q969S8 669 aa24.51■■□□□ 1.51
U2AF1-204ENST00000459639 SRPK1Q96SB4 655 aaKnown RBP24.51■■□□□ 1.51
U2AF1-204ENST00000459639 RHOJQ9H4E5 214 aa24.51■■□□□ 1.51
U2AF1-204ENST00000459639 MAGEE1Q9HCI5 957 aa24.51■■□□□ 1.51
U2AF1-204ENST00000459639 MKS1Q9NXB0 559 aa24.51■■□□□ 1.51
U2AF1-204ENST00000459639 ELOVL2Q9NXB9 296 aa24.51■■□□□ 1.51
U2AF1-204ENST00000459639 ZWINTO95229 277 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 LPOP22079 712 aaPredicted RBP24.5■■□□□ 1.51
U2AF1-204ENST00000459639 IGFBP4P22692 258 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 SLC1A2P43004 574 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 OR13C4Q8NGS5 318 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 ISL2Q96A47 359 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 ECHDC3Q96DC8 303 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 ZNF641Q96N77 438 aaPredicted RBP24.5■■□□□ 1.51
U2AF1-204ENST00000459639 ZDHHC6Q9H6R6 413 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 AURKAO14965 403 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 BNIP3LO60238 219 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 LSP1P33241 339 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 HADHAP40939 763 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 ABL2P42684 1182 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 GALNT7Q86SF2 657 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 ZC3HC1Q86WB0 502 aaKnown RBP24.5■■□□□ 1.51
U2AF1-204ENST00000459639 DENND6AQ8IWF6 608 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 PHTF2Q8N3S3 785 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 TTC30BQ8N4P2 665 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 KDM1BQ8NB78 822 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 OR2A12Q8NGT7 310 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 OR6P1Q8NGX9 317 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 DENND1AQ8TEH3 1009 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 MYLIPQ8WY64 445 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 SUSD6Q92537 303 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 VPS39Q96JC1 886 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 TBATAQ96M53 351 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 SMIM14Q96QK8 99 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 EPS15L1Q9UBC2 864 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 CD207Q9UJ71 328 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 FBXO5Q9UKT4 447 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 ZNF711Q9Y462 761 aa24.5■■□□□ 1.51
U2AF1-204ENST00000459639 SCN8AQ9UQD0 1980 aa24.49■■□□□ 1.51
U2AF1-204ENST00000459639 ZNF106Q9H2Y7 1883 aaKnown RBP24.49■■□□□ 1.51
U2AF1-204ENST00000459639 A0A0J9YYE9 177 aa24.49■■□□□ 1.51
U2AF1-204ENST00000459639 A0A1W2PQ67 120 aa24.49■■□□□ 1.51
U2AF1-204ENST00000459639 SRRM3A6NNA2 597 aaPredicted RBP24.49■■□□□ 1.51
U2AF1-204ENST00000459639 TM9SF1O15321 606 aa24.49■■□□□ 1.51
U2AF1-204ENST00000459639 BUD23O43709 281 aaKnown RBP24.49■■□□□ 1.51
U2AF1-204ENST00000459639 TRBC1P01850 177 aa24.49■■□□□ 1.51
U2AF1-204ENST00000459639 ALDOAP04075 364 aaKnown RBP24.49■■□□□ 1.51
U2AF1-204ENST00000459639 GDI1P31150 447 aa24.49■■□□□ 1.51
U2AF1-204ENST00000459639 RPA3P35244 121 aaPredicted RBP24.49■■□□□ 1.51
U2AF1-204ENST00000459639 EIF2DP41214 584 aaKnown RBP24.49■■□□□ 1.51
U2AF1-204ENST00000459639 ST8SIA6P61647 398 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms