RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 SHMT1P34896 483 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 GNAQP50148 359 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 EFNA5P52803 228 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 RAD23BP54727 409 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 RRP1P56182 461 aaKnown RBP3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 DDR1Q08345 913 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 GRSF1Q12849 480 aaKnown RBP eCLIP3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 DLG1Q12959 904 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 MYBPHQ13203 477 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 TRIP12Q14669 1992 aaPredicted RBP3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 PWP2Q15269 919 aaKnown RBP3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 GSTA3Q16772 222 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 HSP90AB4PQ58FF6 505 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 SGO1Q5FBB7 561 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 C9orf57Q5W0N0 161 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 ACAD10Q6JQN1 1059 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 SPSB3Q6PJ21 355 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 LINGO2Q7L985 606 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 HEATR4Q86WZ0 1026 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 AGBL3Q8NEM8 1001 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 IL17REQ8NFR9 667 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 BEST2Q8NFU1 509 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 NFKBIDQ8NI38 313 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 KLHL29Q96CT2 875 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 SAAL1Q96ER3 474 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 C1QTNF4Q9BXJ3 329 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 PLEKHA4Q9H4M7 779 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 JMJD4Q9H9V9 463 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 PREBQ9HCU5 417 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 BPIFA1Q9NP55 256 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 DDX4Q9NQI0 724 aaKnown RBP3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 SLCO3A1Q9UIG8 710 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 SARDHQ9UL12 918 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 CDC14AQ9UNH5 594 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 PROCRQ9UNN8 238 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 SCINQ9Y6U3 715 aa3.06□□□□□ -1.92
SCARNA18-201ENST00000459004 UTYO14607 1347 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 hDV102S1A0JD36 115 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 USP17L23D6RBM5 183 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 SLC16A5O15375 505 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 BCAT2O15382 392 aaPredicted RBP3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 SEC14L5O43304 696 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 HOXB5P09067 269 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 SRCP12931 536 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 CPOXP36551 454 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 GAS1P54826 345 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 NEXNQ0ZGT2 675 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 COASYQ13057 564 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 DHX34Q14147 1143 aaKnown RBP3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 SF3B4Q15427 424 aaKnown RBP eCLIP3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 CALCRLQ16602 461 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 AMZ1Q400G9 498 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 INTS11Q5TA45 600 aaKnown RBP3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 INO80CQ6PI98 192 aaPredicted RBP3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 RHBDF2Q6PJF5 856 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 SLC46A3Q7Z3Q1 461 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 TDRPQ86YL5 185 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 ARMC8Q8IUR7 673 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 RBMXL3Q8N7X1 1067 aaKnown RBP3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 SMRP1Q8NCR6 262 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 LILRB1Q8NHL6 650 aaPredicted RBP3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 CREB3L4Q8TEY5 395 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 SCMH1Q96GD3 660 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 ADGRG7Q96K78 797 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 SLITRK1Q96PX8 696 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 OR1F2PQ96R84 312 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 AGXT2Q9BYV1 514 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 GLIS2Q9BZE0 524 aaPredicted RBP3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 GAREM1Q9H706 876 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 PRKRIP1Q9H875 184 aaPredicted RBP3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 DDX31Q9H8H2 851 aaKnown RBP3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 BRF2Q9HAW0 419 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 UBN1Q9NPG3 1134 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 MKKSQ9NPJ1 570 aaPredicted RBP3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 SLC9A2Q9UBY0 812 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 SNX9Q9Y5X1 595 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 STON1Q9Y6Q2 735 aa3.05□□□□□ -1.92
SCARNA18-201ENST00000459004 CNTNAP2Q9UHC6 1331 aa3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 A0A1B0GUV1 79 aa3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 PLSCR5A0PG75 271 aa3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 MAGEA13PA6NCF6 341 aa3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 TMEM202A6NGA9 273 aa3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 LRRC53A6NM62 1247 aa3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 SMTNL1A8MU46 457 aa3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 PRR23D1E9PI22 279 aaPredicted RBP3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 LDLRAD4O15165 306 aa3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 TNFSF14O43557 240 aa3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 AGR2O95994 175 aa3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 PRR23D2P0DMB1 279 aaPredicted RBP3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 DDX5P17844 614 aaKnown RBP3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 SSTR2P30874 369 aa3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 CTCFP49711 727 aaPredicted RBP3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 COMPP49747 757 aaPredicted RBP3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 METAP2P50579 478 aaKnown RBP eCLIP3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 EIF3BP55884 814 aaKnown RBP3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 RPL36AP83881 106 aaKnown RBP3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 POU3F1Q03052 451 aaPredicted RBP3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 EEF1A2Q05639 463 aaKnown RBP3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 SNTA1Q13424 505 aa3.04□□□□□ -1.92
SCARNA18-201ENST00000459004 EFNB3Q15768 340 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms