RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 ELFN1P0C7U0 828 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 C6P13671 934 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 KCNA4P22459 653 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 VIPR1P32241 457 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 THOP1P52888 689 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 CLDN2P57739 230 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 ARHGEF7Q14155 803 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 PRKD1Q15139 912 aaPredicted RBP16.23■□□□□ 0.19
CD28-203ENST00000458610 LLGL1Q15334 1064 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 CCDC70Q6NSX1 233 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 GCNT7Q6ZNI0 430 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 PTAR1Q7Z6K3 402 aaPredicted RBP16.23■□□□□ 0.19
CD28-203ENST00000458610 NAXDQ8IW45 347 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 TTC13Q8NBP0 860 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 ARRDC2Q8TBH0 407 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 RHBDD1Q8TEB9 315 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 HAUS1Q96CS2 278 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 ALS2CR12Q96Q35 445 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 CDC6Q99741 560 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 ADGRE3Q9BY15 652 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 SAE1Q9UBE0 346 aaPredicted RBP16.23■□□□□ 0.19
CD28-203ENST00000458610 CA5BQ9Y2D0 317 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 PPIL1Q9Y3C6 166 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 USP34Q70CQ2 3546 aa16.23■□□□□ 0.19
CD28-203ENST00000458610 PSMD11O00231 422 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 RAD51BO15315 384 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 SH3BP5O60239 455 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 PECAM1P16284 738 aaPredicted RBP16.22■□□□□ 0.19
CD28-203ENST00000458610 GRK6P43250 576 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 ACOX1Q15067 660 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 SLC14A2Q15849 920 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 LIPIQ6XZB0 460 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 ZC3H18Q86VM9 953 aaKnown RBP16.22■□□□□ 0.19
CD28-203ENST00000458610 SPATS2Q86XZ4 545 aaKnown RBP16.22■□□□□ 0.19
CD28-203ENST00000458610 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.22■□□□□ 0.19
CD28-203ENST00000458610 CNTD1Q8N815 330 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 DEFB124Q8NES8 71 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 OR13H1Q8NG92 308 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 ATL2Q8NHH9 583 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 LRRN4Q8WUT4 740 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 PIH1D2Q8WWB5 315 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 NSMCE3Q96MG7 304 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 AGAP3Q96P47 875 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 TDRD1Q9BXT4 1180 aaKnown RBP16.22■□□□□ 0.19
CD28-203ENST00000458610 SLC25A51Q9H1U9 297 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 PCDH9Q9HC56 1237 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 B4GALT6Q9UBX8 382 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 TRHDEQ9UKU6 1024 aa16.22■□□□□ 0.19
CD28-203ENST00000458610 POM121BA6NF01 834 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 H7C0C1 242 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 FZD6O60353 706 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 STK10O94804 968 aaKnown RBP16.21■□□□□ 0.19
CD28-203ENST00000458610 FTCDO95954 541 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 PRKCGP05129 697 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 PYGMP11217 842 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 HTR1BP28222 390 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 CD86P42081 329 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 TNNT3P45378 269 aaPredicted RBP16.21■□□□□ 0.19
CD28-203ENST00000458610 ATP5OP48047 213 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 PFN3P60673 137 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 NIPAL4Q0D2K0 466 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 RALGDSQ12967 914 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 ZBTB17Q13105 803 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 PRAMEF14Q5SWL7 426 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 PSAPL1Q6NUJ1 521 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 CDKL3Q8IVW4 592 aaPredicted RBP16.21■□□□□ 0.19
CD28-203ENST00000458610 TP53I13Q8NBR0 393 aaPredicted RBP16.21■□□□□ 0.19
CD28-203ENST00000458610 HTR3CQ8WXA8 447 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 ALG3Q92685 438 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 HES6Q96HZ4 224 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 TEKT5Q96M29 485 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 MCCC1Q96RQ3 725 aaPredicted RBP16.21■□□□□ 0.19
CD28-203ENST00000458610 SRPK1Q96SB4 655 aaKnown RBP16.21■□□□□ 0.19
CD28-203ENST00000458610 GLOD4Q9HC38 313 aa16.21■□□□□ 0.19
CD28-203ENST00000458610 TRPM6Q9BX84 2022 aa16.21■□□□□ 0.18
CD28-203ENST00000458610 SPTY2D1-AS1A0A0U1RR47 76 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 H3BM21 787 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 PDE2AO00408 941 aaPredicted RBP16.2■□□□□ 0.18
CD28-203ENST00000458610 RECQL5O94762 991 aaPredicted RBP16.2■□□□□ 0.18
CD28-203ENST00000458610 HEXIM1O94992 359 aaKnown RBP16.2■□□□□ 0.18
CD28-203ENST00000458610 ZNF30P17039 623 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 PTPN3P26045 913 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 HNRNPKP61978 463 aaKnown RBP eCLIP16.2■□□□□ 0.18
CD28-203ENST00000458610 SKOR1P84550 965 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 CCZ1BP86790 482 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 CCZ1P86791 482 aaPredicted RBP16.2■□□□□ 0.18
CD28-203ENST00000458610 ADCY2Q08462 1091 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 MTM1Q13496 603 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 PDE1CQ14123 709 aaPredicted RBP16.2■□□□□ 0.18
CD28-203ENST00000458610 NOMO1Q15155 1222 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 TRIP6Q15654 476 aaKnown RBP16.2■□□□□ 0.18
CD28-203ENST00000458610 WSCD2Q2TBF2 565 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 HS1BP3Q53T59 392 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 PID1Q7Z2X4 250 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 PARGQ86W56 976 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 RAVER1Q8IY67 606 aaKnown RBP16.2■□□□□ 0.18
CD28-203ENST00000458610 ACTL9Q8TC94 416 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 SAP25Q8TEE9 199 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 BTN2A2Q8WVV5 523 aa16.2■□□□□ 0.18
CD28-203ENST00000458610 IMP4Q96G21 291 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms