RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 PISDQ9UG56 409 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 DACH1Q9UI36 760 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 PCDHGA4Q9Y5G9 962 aa10.5□□□□□ -0.73
HDLBP-227ENST00000458564 UNC13CQ8NB66 2214 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 TCRBV5S1A1TA0A578 114 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 TMEM202A6NGA9 273 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 PES1O00541 588 aaKnown RBP10.49□□□□□ -0.73
HDLBP-227ENST00000458564 TNFP01375 233 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 PCCBP05166 539 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 ITIH1P19827 911 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 GPD1P21695 349 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 KELP23276 732 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 SOX5P35711 763 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 TRIM23P36406 574 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 NSFP46459 744 aaKnown RBP10.49□□□□□ -0.73
HDLBP-227ENST00000458564 CSNK1DP48730 415 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 ZNF143P52747 638 aaPredicted RBP10.49□□□□□ -0.73
HDLBP-227ENST00000458564 RALGDSQ12967 914 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 SRSF6Q13247 344 aaKnown RBP10.49□□□□□ -0.73
HDLBP-227ENST00000458564 TCEA2Q15560 299 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 C14orf28Q4W4Y0 310 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 HSP90AA4PQ58FG1 418 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 TCP11X2Q5H9J9 407 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 CT47A1Q5JQC4 288 aaPredicted RBP10.49□□□□□ -0.73
HDLBP-227ENST00000458564 WDR59Q6PJI9 974 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 NYAP1Q6ZVC0 841 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 RD3Q7Z3Z2 195 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 ZSWIM9Q86XI8 627 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 PHF13Q86YI8 300 aaPredicted RBP10.49□□□□□ -0.73
HDLBP-227ENST00000458564 NETO2Q8NC67 525 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 OR56A4Q8NGH8 313 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 OR1E3Q8WZA6 343 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 SPOCK2Q92563 424 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 EXTL1Q92935 676 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 FUBP1Q96AE4 644 aaKnown RBP10.49□□□□□ -0.73
HDLBP-227ENST00000458564 ECHDC3Q96DC8 303 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 ADAM22Q9P0K1 906 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 IL17BQ9UHF5 180 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 HEMK1Q9Y5R4 338 aaPredicted RBP10.49□□□□□ -0.73
HDLBP-227ENST00000458564 RELNP78509 3460 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 LRRK1Q38SD2 2015 aa10.49□□□□□ -0.73
HDLBP-227ENST00000458564 PRAMEF33A0A0G2JMD5 474 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 SIGLEC16A6NMB1 481 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 C9orf172C9J069 976 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 CACNB4O00305 520 aaPredicted RBP10.48□□□□□ -0.73
HDLBP-227ENST00000458564 CCP110O43303 1012 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 SUV39H1O43463 412 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 BUB1BO60566 1050 aaPredicted RBP10.48□□□□□ -0.73
HDLBP-227ENST00000458564 PRAMEF10O60809 474 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 PRAMEF11O60813 436 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 RECQL5O94762 991 aaPredicted RBP10.48□□□□□ -0.73
HDLBP-227ENST00000458564 CALB1P05937 261 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 KRT10P13645 584 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 SERPINA4P29622 427 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 NDST2P52849 883 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 POLR2FP61218 127 aaKnown RBP10.48□□□□□ -0.73
HDLBP-227ENST00000458564 NR1D2Q14995 579 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 CLPPQ16740 277 aaPredicted RBP10.48□□□□□ -0.73
HDLBP-227ENST00000458564 CLEC16AQ2KHT3 1053 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 MANEAQ5SRI9 462 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 CFAP58Q5T655 872 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 AFMIDQ63HM1 303 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 LIPIQ6XZB0 460 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 ATG14Q6ZNE5 492 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 MON1BQ7L1V2 547 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 TMPRSS9Q7Z410 1059 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 ZNF438Q7Z4V0 828 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 TAF8Q7Z7C8 310 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 PHLDB2Q86SQ0 1253 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 C17orf82Q86X59 251 aaPredicted RBP10.48□□□□□ -0.73
HDLBP-227ENST00000458564 CAMK1DQ8IU85 385 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 PLA2G15Q8NCC3 412 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 FAM46DQ8NEK8 389 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 PCDHB18PQ96TA0 734 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 ARHGAP9Q9BRR9 750 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 SELENOOQ9BVL4 669 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 CLSTN2Q9H4D0 955 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 ATP13A3Q9H7F0 1226 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 SAMSN1Q9NSI8 373 aaKnown RBP10.48□□□□□ -0.73
HDLBP-227ENST00000458564 FOXJ2Q9P0K8 574 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 LRIT1Q9P2V4 623 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 FZD10Q9ULW2 581 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 RNF215Q9Y6U7 377 aa10.48□□□□□ -0.73
HDLBP-227ENST00000458564 B4DGG1 531 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 EIF3CLB5ME19 914 aaKnown RBP10.47□□□□□ -0.73
HDLBP-227ENST00000458564 J3KR12 359 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 HGSO14964 777 aaPredicted RBP10.47□□□□□ -0.73
HDLBP-227ENST00000458564 EPHB6O15197 1021 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 CREB3O43889 395 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 CPNE6O95741 557 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 ELFN1P0C7U0 828 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 FAM87AP0C7U9 286 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 GM2AP17900 193 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 ETV5P41161 510 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 STAT1P42224 750 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 RGRP47804 291 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 B4GALNT1Q00973 533 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 ARHGEF7Q14155 803 aa10.47□□□□□ -0.73
HDLBP-227ENST00000458564 TSR1Q2NL82 804 aaKnown RBP10.47□□□□□ -0.73
HDLBP-227ENST00000458564 PPP1R15BQ5SWA1 713 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms