RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 KCNMB4Q86W47 210 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 C1orf210Q8IVY1 113 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 NPAS3Q8IXF0 933 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 LMNTD2Q8IXW0 634 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 SRRM1Q8IYB3 904 aaKnown RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 AHI1Q8N157 1196 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 AGGF1Q8N302 714 aaeCLIP9.01□□□□□ -0.97
VPS50-207ENST00000458530 PGBD5Q8N414 524 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 OR52K2Q8NGK3 314 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 ITFG1Q8TB96 612 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 BPIFB1Q8TDL5 484 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 DCAKDQ8WVC6 231 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 OSCP1Q8WVF1 389 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 NELL1Q92832 810 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 ATP2A3Q93084 1043 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 BHMTQ93088 406 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 ISG20Q96AZ6 181 aaKnown RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 ZBTB9Q96C00 473 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 ZNF419Q96HQ0 510 aaPredicted RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 CPNE1Q99829 537 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 APOL2Q9BQE5 337 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 FAM167BQ9BTA0 163 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 CEP44Q9C0F1 390 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 TRABDQ9H4I3 376 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 TBC1D17Q9HA65 648 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 TRPV4Q9HBA0 871 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 ABCB8Q9NUT2 735 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 DUS2Q9NX74 493 aaKnown RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 HACD3Q9P035 362 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 CTNNAL1Q9UBT7 734 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 GGA2Q9UJY4 613 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 RIMKLBQ9ULI2 386 aa9.01□□□□□ -0.97
VPS50-207ENST00000458530 RPL26L1Q9UNX3 145 aaKnown RBP9.01□□□□□ -0.97
VPS50-207ENST00000458530 ZNF106Q9H2Y7 1883 aaKnown RBP9□□□□□ -0.97
VPS50-207ENST00000458530 LOC285095A0A1B0GVY8 99 aa9□□□□□ -0.97
VPS50-207ENST00000458530 A0A1W2PQ67 120 aa9□□□□□ -0.97
VPS50-207ENST00000458530 PRPF4O43172 522 aaKnown RBP eCLIP9□□□□□ -0.97
VPS50-207ENST00000458530 HOXC11O43248 304 aaPredicted RBP9□□□□□ -0.97
VPS50-207ENST00000458530 TIMM44O43615 452 aa9□□□□□ -0.97
VPS50-207ENST00000458530 SNAP91O60641 907 aa9□□□□□ -0.97
VPS50-207ENST00000458530 SOCS5O75159 536 aa9□□□□□ -0.97
VPS50-207ENST00000458530 CRTAMO95727 393 aa9□□□□□ -0.97
VPS50-207ENST00000458530 GSRP00390 522 aa9□□□□□ -0.97
VPS50-207ENST00000458530 ASLP04424 464 aa9□□□□□ -0.97
VPS50-207ENST00000458530 MMP2P08253 660 aa9□□□□□ -0.97
VPS50-207ENST00000458530 ADH5P11766 374 aa9□□□□□ -0.97
VPS50-207ENST00000458530 SRFP11831 508 aa9□□□□□ -0.97
VPS50-207ENST00000458530 TYRP14679 529 aa9□□□□□ -0.97
VPS50-207ENST00000458530 BRAFP15056 766 aa9□□□□□ -0.97
VPS50-207ENST00000458530 CR2P20023 1033 aa9□□□□□ -0.97
VPS50-207ENST00000458530 SDHBP21912 280 aa9□□□□□ -0.97
VPS50-207ENST00000458530 GLDCP23378 1020 aa9□□□□□ -0.97
VPS50-207ENST00000458530 NFKBIAP25963 317 aa9□□□□□ -0.97
VPS50-207ENST00000458530 GCAP28676 217 aa9□□□□□ -0.97
VPS50-207ENST00000458530 SPRP35270 261 aaPredicted RBP9□□□□□ -0.97
VPS50-207ENST00000458530 GP5P40197 560 aa9□□□□□ -0.97
VPS50-207ENST00000458530 ATP1A2P50993 1020 aa9□□□□□ -0.97
VPS50-207ENST00000458530 SLC18A1P54219 525 aa9□□□□□ -0.97
VPS50-207ENST00000458530 CRADDP78560 199 aa9□□□□□ -0.97
VPS50-207ENST00000458530 THOC5Q13769 683 aaKnown RBP9□□□□□ -0.97
VPS50-207ENST00000458530 POU6F1Q14863 301 aa9□□□□□ -0.97
VPS50-207ENST00000458530 EFTUD2Q15029 972 aaKnown RBP eCLIP9□□□□□ -0.97
VPS50-207ENST00000458530 E2F5Q15329 346 aa9□□□□□ -0.97
VPS50-207ENST00000458530 CYTH1Q15438 398 aa9□□□□□ -0.97
VPS50-207ENST00000458530 FSCBQ5H9T9 825 aa9□□□□□ -0.97
VPS50-207ENST00000458530 SIRPB2Q5JXA9 342 aa9□□□□□ -0.97
VPS50-207ENST00000458530 LY6G5CQ5SRR4 150 aa9□□□□□ -0.97
VPS50-207ENST00000458530 CERCAMQ5T4B2 595 aa9□□□□□ -0.97
VPS50-207ENST00000458530 GRTP1Q5TC63 336 aa9□□□□□ -0.97
VPS50-207ENST00000458530 DENND5AQ6IQ26 1287 aa9□□□□□ -0.97
VPS50-207ENST00000458530 LEKR1Q6ZMV7 388 aa9□□□□□ -0.97
VPS50-207ENST00000458530 SRLQ86TD4 932 aa9□□□□□ -0.97
VPS50-207ENST00000458530 YAF2Q8IY57 180 aa9□□□□□ -0.97
VPS50-207ENST00000458530 NDUFAF2Q8N183 169 aa9□□□□□ -0.97
VPS50-207ENST00000458530 SLC44A3Q8N4M1 653 aa9□□□□□ -0.97
VPS50-207ENST00000458530 SLC25A41Q8N5S1 370 aa9□□□□□ -0.97
VPS50-207ENST00000458530 PCDH20Q8N6Y1 951 aaKnown RBP9□□□□□ -0.97
VPS50-207ENST00000458530 PAF1Q8N7H5 531 aa9□□□□□ -0.97
VPS50-207ENST00000458530 DDX51Q8N8A6 666 aaKnown RBP eCLIP9□□□□□ -0.97
VPS50-207ENST00000458530 DYDC1Q8WWB3 177 aa9□□□□□ -0.97
VPS50-207ENST00000458530 NXPE3Q969Y0 559 aa9□□□□□ -0.97
VPS50-207ENST00000458530 CENPTQ96BT3 561 aa9□□□□□ -0.97
VPS50-207ENST00000458530 MRRFQ96E11 262 aaKnown RBP9□□□□□ -0.97
VPS50-207ENST00000458530 ALG14Q96F25 216 aa9□□□□□ -0.97
VPS50-207ENST00000458530 SGSM3Q96HU1 749 aa9□□□□□ -0.97
VPS50-207ENST00000458530 ASB16Q96NS5 453 aa9□□□□□ -0.97
VPS50-207ENST00000458530 TUBGCP5Q96RT8 1024 aa9□□□□□ -0.97
VPS50-207ENST00000458530 TMUB1Q9BVT8 246 aa9□□□□□ -0.97
VPS50-207ENST00000458530 TDRD1Q9BXT4 1180 aaKnown RBP9□□□□□ -0.97
VPS50-207ENST00000458530 IQCGQ9H095 443 aaKnown RBP9□□□□□ -0.97
VPS50-207ENST00000458530 ATP13A3Q9H7F0 1226 aa9□□□□□ -0.97
VPS50-207ENST00000458530 ZFP14Q9HCL3 533 aa9□□□□□ -0.97
VPS50-207ENST00000458530 KCNK9Q9NPC2 374 aa9□□□□□ -0.97
VPS50-207ENST00000458530 SLC2A4RGQ9NR83 387 aa9□□□□□ -0.97
VPS50-207ENST00000458530 C20orf96Q9NUD7 363 aaPredicted RBP9□□□□□ -0.97
VPS50-207ENST00000458530 INTS9Q9NV88 658 aaKnown RBP9□□□□□ -0.97
VPS50-207ENST00000458530 PIH1D1Q9NWS0 290 aaKnown RBP9□□□□□ -0.97
VPS50-207ENST00000458530 PLK2Q9NYY3 685 aa9□□□□□ -0.97
VPS50-207ENST00000458530 LHX3Q9UBR4 397 aa9□□□□□ -0.97
VPS50-207ENST00000458530 FBXL21Q9UKT6 434 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms