RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 CDC6Q99741 560 aa18.78■□□□□ 0.6
USP39-209ENST00000458268 HEMGNQ9BXL5 484 aa18.78■□□□□ 0.6
USP39-209ENST00000458268 ERVMER34-1Q9H9K5 563 aa18.78■□□□□ 0.6
USP39-209ENST00000458268 GOLGA6AQ9NYA3 693 aa18.78■□□□□ 0.6
USP39-209ENST00000458268 TRIM10Q9UDY6 481 aa18.78■□□□□ 0.6
USP39-209ENST00000458268 A0A0U1RQJ8 604 aa18.77■□□□□ 0.6
USP39-209ENST00000458268 SCAMP1O15126 338 aa18.77■□□□□ 0.6
USP39-209ENST00000458268 ZRANB2O95218 330 aaKnown RBP eCLIP18.77■□□□□ 0.6
USP39-209ENST00000458268 LDOC1O95751 146 aaPredicted RBP18.77■□□□□ 0.6
USP39-209ENST00000458268 ALPIP09923 528 aa18.77■□□□□ 0.6
USP39-209ENST00000458268 PMLP29590 882 aa18.77■□□□□ 0.6
USP39-209ENST00000458268 RALGDSQ12967 914 aa18.77■□□□□ 0.6
USP39-209ENST00000458268 ZBTB17Q13105 803 aa18.77■□□□□ 0.6
USP39-209ENST00000458268 TFDP2Q14188 446 aa18.77■□□□□ 0.6
USP39-209ENST00000458268 FZD2Q14332 565 aa18.77■□□□□ 0.6
USP39-209ENST00000458268 HS1BP3Q53T59 392 aa18.77■□□□□ 0.6
USP39-209ENST00000458268 LIPIQ6XZB0 460 aa18.77■□□□□ 0.6
USP39-209ENST00000458268 CHCHD4Q8N4Q1 142 aa18.77■□□□□ 0.6
USP39-209ENST00000458268 TEX26Q8N6G2 289 aa18.77■□□□□ 0.6
USP39-209ENST00000458268 CENPTQ96BT3 561 aa18.77■□□□□ 0.6
USP39-209ENST00000458268 RBM41Q96IZ5 413 aaKnown RBP18.77■□□□□ 0.6
USP39-209ENST00000458268 AGAP3Q96P47 875 aa18.77■□□□□ 0.6
USP39-209ENST00000458268 TSGA13Q96PP4 275 aa18.77■□□□□ 0.6
USP39-209ENST00000458268 SMIM14Q96QK8 99 aa18.77■□□□□ 0.6
USP39-209ENST00000458268 UCKL1Q9NWZ5 548 aa18.77■□□□□ 0.6
USP39-209ENST00000458268 APOBEC2Q9Y235 224 aaKnown RBP18.77■□□□□ 0.6
USP39-209ENST00000458268 CHKBQ9Y259 395 aa18.77■□□□□ 0.6
USP39-209ENST00000458268 A0A0U1RQS6 177 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 F5H423 210 aaPredicted RBP18.76■□□□□ 0.59
USP39-209ENST00000458268 RECQL5O94762 991 aaPredicted RBP18.76■□□□□ 0.59
USP39-209ENST00000458268 PGLSO95336 258 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 PDHA1P08559 390 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 CYP2A6P11509 494 aaPredicted RBP18.76■□□□□ 0.59
USP39-209ENST00000458268 PECAM1P16284 738 aaPredicted RBP18.76■□□□□ 0.59
USP39-209ENST00000458268 NFKBIAP25963 317 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 VIPR1P32241 457 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 CD86P42081 329 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 PPIDQ08752 370 aaKnown RBP18.76■□□□□ 0.59
USP39-209ENST00000458268 NIPAL4Q0D2K0 466 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 KIF5AQ12840 1032 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 DNAJC3Q13217 504 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 ARHGEF7Q14155 803 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 WSCD2Q2TBF2 565 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 TFDP3Q5H9I0 405 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 RD3Q7Z3Z2 195 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 KDELC2Q7Z4H8 507 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 SLCO6A1Q86UG4 719 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 ZC3H18Q86VM9 953 aaKnown RBP18.76■□□□□ 0.59
USP39-209ENST00000458268 PARGQ86W56 976 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 DCP2Q8IU60 420 aaKnown RBP18.76■□□□□ 0.59
USP39-209ENST00000458268 KATNAL2Q8IYT4 538 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 LPCAT1Q8NF37 534 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 FAM174AQ8TBP5 190 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 KIAA1524Q8TCG1 905 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 ASB12Q8WXK4 309 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 PHTF1Q9UMS5 762 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 OR1A2Q9Y585 309 aa18.76■□□□□ 0.59
USP39-209ENST00000458268 hCG_1818297A0A087WSY0 165 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 ZNF487B1APH4 448 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 H3BM21 787 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 HTRA2O43464 458 aaPredicted RBP18.75■□□□□ 0.59
USP39-209ENST00000458268 PTMAP06454 111 aaKnown RBP18.75■□□□□ 0.59
USP39-209ENST00000458268 JUNDP17535 347 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 DGKAP23743 735 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 RXRGP48443 463 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 ADCY2Q08462 1091 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 INPP5AQ14642 412 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 CNGA3Q16281 694 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 RALGPS1Q5JS13 557 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 USP45Q70EL2 814 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 TSPAN33Q86UF1 283 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 VSIG1Q86XK7 387 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 RCOR2Q8IZ40 523 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 RBFAQ8N0V3 343 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 NDUFAF2Q8N183 169 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 TXLNBQ8N3L3 684 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 PLA2G15Q8NCC3 412 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 BAHD1Q8TBE0 780 aaPredicted RBP18.75■□□□□ 0.59
USP39-209ENST00000458268 LMX1AQ8TE12 382 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 P3H4Q92791 437 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 SCNM1Q9BWG6 230 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 SUDS3Q9H7L9 328 aaPredicted RBP18.75■□□□□ 0.59
USP39-209ENST00000458268 MOSPD1Q9UJG1 213 aa18.75■□□□□ 0.59
USP39-209ENST00000458268 SPTY2D1-AS1A0A0U1RR47 76 aa18.74■□□□□ 0.59
USP39-209ENST00000458268 A0A1W2PQ67 120 aa18.74■□□□□ 0.59
USP39-209ENST00000458268 NPIPB15A6NHN6 443 aaPredicted RBP18.74■□□□□ 0.59
USP39-209ENST00000458268 ENC1O14682 589 aa18.74■□□□□ 0.59
USP39-209ENST00000458268 TNFSF14O43557 240 aa18.74■□□□□ 0.59
USP39-209ENST00000458268 PIAS2O75928 621 aa18.74■□□□□ 0.59
USP39-209ENST00000458268 CA4P22748 312 aa18.74■□□□□ 0.59
USP39-209ENST00000458268 GSDMDP57764 484 aa18.74■□□□□ 0.59
USP39-209ENST00000458268 PFN3P60673 137 aa18.74■□□□□ 0.59
USP39-209ENST00000458268 HNRNPKP61978 463 aaKnown RBP eCLIP18.74■□□□□ 0.59
USP39-209ENST00000458268 DAB2P98082 770 aa18.74■□□□□ 0.59
USP39-209ENST00000458268 C1orf61Q13536 156 aa18.74■□□□□ 0.59
USP39-209ENST00000458268 PTK2BQ14289 1009 aa18.74■□□□□ 0.59
USP39-209ENST00000458268 PCSK7Q16549 785 aa18.74■□□□□ 0.59
USP39-209ENST00000458268 FAXCQ5TGI0 409 aa18.74■□□□□ 0.59
USP39-209ENST00000458268 ENPP7Q6UWV6 458 aa18.74■□□□□ 0.59
USP39-209ENST00000458268 DBX2Q6ZNG2 339 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms