RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 LZTR1Q8N653 840 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 HDAC10Q969S8 669 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 PPP1R16AQ96I34 528 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 COMMD9Q9P000 198 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.73■□□□□ 0.75
SNX27-204ENST00000458013 ZMYM2Q9UBW7 1377 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 MCIDASD6RGH6 385 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 TLX1P31314 330 aaPredicted RBP19.73■□□□□ 0.75
SNX27-204ENST00000458013 CD52P31358 61 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 PSMD4P55036 377 aaKnown RBP19.73■□□□□ 0.75
SNX27-204ENST00000458013 QPRTQ15274 297 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 ZNF410Q86VK4 478 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 HTRA1Q92743 480 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 B3GNT5Q9BYG0 378 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 NOL11Q9H8H0 719 aaKnown RBP19.73■□□□□ 0.75
SNX27-204ENST00000458013 MEGF6O75095 1541 aa19.73■□□□□ 0.75
SNX27-204ENST00000458013 ITGA2BP08514 1039 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 SLC26A3P40879 764 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 ZNF143P52747 638 aaPredicted RBP19.72■□□□□ 0.75
SNX27-204ENST00000458013 SERPINA13PQ6UXR4 307 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 DCBLD1Q8N8Z6 715 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 MAGEC3Q8TD91 643 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 PIH1D2Q8WWB5 315 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 SGTAO43765 313 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 C1orf186Q6ZWK4 172 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 ART5Q96L15 291 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 AARSD1Q9BTE6 412 aaKnown RBP19.72■□□□□ 0.75
SNX27-204ENST00000458013 ASB7Q9H672 318 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 TPST2O60704 377 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 C6orf52Q5T4I8 152 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 GSTCDQ8NEC7 633 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 MORF4L1Q9UBU8 362 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 RAB21Q9UL25 225 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 PCCBP05166 539 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 POU5F1Q01860 360 aaKnown RBP19.72■□□□□ 0.75
SNX27-204ENST00000458013 ELAVL2Q12926 359 aaKnown RBP19.72■□□□□ 0.75
SNX27-204ENST00000458013 A0A075B6Q4 140 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 SLC28A1O00337 649 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 SIN3BO75182 1162 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 STARP49675 285 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 DHDDSQ86SQ9 333 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 LRRC49Q8IUZ0 686 aa19.72■□□□□ 0.75
SNX27-204ENST00000458013 MMADHCQ9H3L0 296 aaPredicted RBP19.72■□□□□ 0.75
SNX27-204ENST00000458013 ADSSP30520 456 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 PURAQ00577 322 aaKnown RBP19.71■□□□□ 0.75
SNX27-204ENST00000458013 TAB1Q15750 504 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 HECTD3Q5T447 861 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 CAMK1DQ8IU85 385 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 TEX47Q8TBZ9 253 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 RNF157Q96PX1 679 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 WDR55Q9H6Y2 383 aaPredicted RBP19.71■□□□□ 0.75
SNX27-204ENST00000458013 WBP11Q9Y2W2 641 aaKnown RBP19.71■□□□□ 0.75
SNX27-204ENST00000458013 TRIM38O00635 465 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 FMO1Q01740 532 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 ZHX1-C8orf76Q96EF9 292 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 LEF1Q9UJU2 399 aaPredicted RBP19.71■□□□□ 0.75
SNX27-204ENST00000458013 KPNA5O15131 536 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 KPNA6O60684 536 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 TOP3BO95985 862 aaKnown RBP19.71■□□□□ 0.75
SNX27-204ENST00000458013 STXBP1P61764 594 aaKnown RBP19.71■□□□□ 0.75
SNX27-204ENST00000458013 FAM131AQ6UXB0 335 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 PIGZQ86VD9 579 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 VCPIP1Q96JH7 1222 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 SLC38A2Q96QD8 506 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 TMLHEQ9NVH6 421 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 A0A1W2PQ67 120 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 ULK1O75385 1050 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 ICAM3P32942 547 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 BRCC3P46736 316 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 NAB1Q13506 487 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 UBE2J2Q8N2K1 259 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 ACO2Q99798 780 aaKnown RBP19.71■□□□□ 0.75
SNX27-204ENST00000458013 RNPEPL1Q9HAU8 725 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 MYPNQ86TC9 1320 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 YAP1P46937 504 aaKnown RBP19.71■□□□□ 0.75
SNX27-204ENST00000458013 RHBDF2Q6PJF5 856 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 GALNTL5Q7Z4T8 443 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 STK40Q8N2I9 435 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 ART4Q93070 314 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 C18orf25Q96B23 403 aaPredicted RBP19.71■□□□□ 0.75
SNX27-204ENST00000458013 CDH19Q9H159 772 aa19.71■□□□□ 0.75
SNX27-204ENST00000458013 IMP3Q9NV31 184 aaKnown RBP19.71■□□□□ 0.75
SNX27-204ENST00000458013 TNS2Q63HR2 1409 aa19.71■□□□□ 0.74
SNX27-204ENST00000458013 A0A1W2PQH9 124 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 H3BMM5 538 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 GUCY1B2O75343 617 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 SUZ12Q15022 739 aaKnown RBP19.7■□□□□ 0.74
SNX27-204ENST00000458013 ULK2Q8IYT8 1036 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 MYDGFQ969H8 173 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 LENG9Q96B70 501 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 SGK2Q9HBY8 427 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 RPS6KA6Q9UK32 745 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 RFXANKO14593 260 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 CCL16O15467 120 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 SNX3O60493 162 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 EFNA1P20827 205 aaPredicted RBP19.7■□□□□ 0.74
SNX27-204ENST00000458013 TUFMP49411 452 aaKnown RBP19.7■□□□□ 0.74
SNX27-204ENST00000458013 CXCR3P49682 368 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 AMPD2Q01433 879 aa19.7■□□□□ 0.74
SNX27-204ENST00000458013 IKBKEQ14164 716 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms