RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 GUSBP11Q6P575 273 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 ARHGAP36Q6ZRI8 547 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 RD3Q7Z3Z2 195 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 ARFGAP1Q8N6T3 406 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 NPWQ8N729 165 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 HSPH1Q92598 858 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 MED8Q96G25 268 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 POLR1BQ9H9Y6 1135 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 ASCL3Q9NQ33 180 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 THSD1Q9NS62 852 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 SALL4Q9UJQ4 1053 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 U3KQA8 63 aa15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 UBR5O95071 2799 aaPredicted RBP15.86■□□□□ 0.13
CHCHD3-204ENST00000457942 SYCE3A1L190 88 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 RIOK3O14730 519 aaKnown RBP15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 TPP1O14773 563 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 BUB1BO60566 1050 aaPredicted RBP15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 GCATO75600 419 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 ELFN1P0C7U0 828 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 TSHRP16473 764 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 MMP12P39900 470 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 RGRP47804 291 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 SCNN1BP51168 640 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 NFKB2Q00653 900 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 IL10RBQ08334 325 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 ZNF235Q14590 738 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 ELOCQ15369 112 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 ZSCAN23Q3MJ62 389 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 CDCP2Q5VXM1 449 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 ESRP1Q6NXG1 681 aaKnown RBP15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 ENPP7Q6UWV6 458 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 PSTKQ8IV42 348 aaKnown RBP15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 ARHGAP12Q8IWW6 846 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 ATL2Q8NHH9 583 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 WBP1Q96G27 269 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 EDEM3Q9BZQ6 932 aa15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 CWC15Q9P013 229 aaKnown RBP15.85■□□□□ 0.13
CHCHD3-204ENST00000457942 A0A1W2PNU3 283 aaPredicted RBP15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 TMEM110-MUSTN1A8MSY1 372 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 LMO7DNF2Z398 122 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 RASGRP1O95267 797 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 TGM2P21980 687 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 SSR1P43307 286 aaKnown RBP15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 LSSP48449 732 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 CSNK1DP48730 415 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 RENBPP51606 427 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 ERVPABLB-1P60509 514 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 INPP5AQ14642 412 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 RFTN1Q14699 578 aaPredicted RBP15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 LBRQ14739 615 aaKnown RBP15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 NFATC4Q14934 902 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 IQCB1Q15051 598 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 WSCD2Q2TBF2 565 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 TMCO4Q5TGY1 634 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 TMCO3Q6UWJ1 677 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 ZSWIM9Q86XI8 627 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 LSMEM2Q8N112 164 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 FSTL5Q8N475 847 aaPredicted RBP15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 LZTR1Q8N653 840 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 SCG3Q8WXD2 468 aaKnown RBP15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 NAT6Q93015 286 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 TSACCQ96A04 125 aaPredicted RBP15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 ATXN7L3BQ96GX2 97 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 SIRPGQ9P1W8 387 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 GULP1Q9UBP9 304 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 KLQ9UEF7 1012 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 SEPT3Q9UH03 358 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 OR1A2Q9Y585 309 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 HEMK1Q9Y5R4 338 aaPredicted RBP15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 PTPN13Q12923 2485 aa15.84■□□□□ 0.13
CHCHD3-204ENST00000457942 GOLGA6L19H0YKK7 550 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 YY2O15391 372 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 DXOO77932 396 aaKnown RBP15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 CELA2BP08218 269 aaPredicted RBP15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 ALPIP09923 528 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 PCK1P35558 622 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 PEX5P50542 639 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 HK3P52790 923 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 AP1S1P61966 158 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 POLR2LP62875 67 aaKnown RBP15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 FANCCQ00597 558 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 DPYSQ14117 519 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 NR1I3Q14994 352 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 NFKBIBQ15653 356 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 AFMIDQ63HM1 303 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 RBM44Q6ZP01 1051 aaKnown RBP15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 CYP4V2Q6ZWL3 525 aaPredicted RBP15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 LUZP1Q86V48 1076 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 SLC35F3Q8IY50 421 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 BBS5Q8N3I7 341 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 ATPAF2Q8N5M1 289 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 TPCN2Q8NHX9 752 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 PCDH19Q8TAB3 1148 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 PDCD6IPQ8WUM4 868 aaKnown RBP15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 NSMCE1Q8WV22 266 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 CPLX3Q8WVH0 158 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 TBATAQ96M53 351 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 WDR92Q96MX6 357 aa15.83■□□□□ 0.12
CHCHD3-204ENST00000457942 APOOQ9BUR5 198 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms