RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 TUFMP49411 452 aaKnown RBP16.75■□□□□ 0.27
CCDC43-202ENST00000457422 CDH4P55283 916 aa16.75■□□□□ 0.27
CCDC43-202ENST00000457422 AP2B1P63010 937 aa16.75■□□□□ 0.27
CCDC43-202ENST00000457422 GNA12Q03113 381 aa16.75■□□□□ 0.27
CCDC43-202ENST00000457422 CUL3Q13618 768 aa16.75■□□□□ 0.27
CCDC43-202ENST00000457422 MUM1Q2TAK8 710 aa16.75■□□□□ 0.27
CCDC43-202ENST00000457422 FAM45BPQ6NSW5 357 aa16.75■□□□□ 0.27
CCDC43-202ENST00000457422 BBS5Q8N3I7 341 aa16.75■□□□□ 0.27
CCDC43-202ENST00000457422 FAM45AQ8TCE6 357 aa16.75■□□□□ 0.27
CCDC43-202ENST00000457422 BRSK1Q8TDC3 778 aa16.75■□□□□ 0.27
CCDC43-202ENST00000457422 SCLYQ96I15 445 aa16.75■□□□□ 0.27
CCDC43-202ENST00000457422 WASF2Q9Y6W5 498 aa16.75■□□□□ 0.27
CCDC43-202ENST00000457422 A0A0D9SEW6 157 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 RGSL1A5PLK6 1076 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 NEMP2A6NFY4 417 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 A8MT66 165 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 ZMPSTE24O75844 475 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 IPO13O94829 963 aaKnown RBP16.74■□□□□ 0.27
CCDC43-202ENST00000457422 SERPINF2P08697 491 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 SATB1Q01826 763 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 GALNT1Q10472 559 aaPredicted RBP16.74■□□□□ 0.27
CCDC43-202ENST00000457422 GALNT3Q14435 633 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 HERC3Q15034 1050 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 RNF135Q8IUD6 432 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 DEFB107AQ8IZN7 70 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 OR7D4Q8NG98 312 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 RP9Q8TA86 221 aaKnown RBP16.74■□□□□ 0.27
CCDC43-202ENST00000457422 TRIB3Q96RU7 358 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 BACE2Q9Y5Z0 518 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 ACTL7AQ9Y615 435 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 ANKRD36A6QL64 1941 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 TRPC5OSA6NMA1 111 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 H3BNC9 293 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 LIN7AO14910 233 aaPredicted RBP16.74■□□□□ 0.27
CCDC43-202ENST00000457422 RPP40O75818 363 aaKnown RBP16.74■□□□□ 0.27
CCDC43-202ENST00000457422 GJB5O95377 273 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 PENKP01210 267 aaPredicted RBP16.74■□□□□ 0.27
CCDC43-202ENST00000457422 JUNP05412 331 aaKnown RBP16.74■□□□□ 0.27
CCDC43-202ENST00000457422 ANPEPP15144 967 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 SLC11A2P49281 568 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 ZRSR2Q15696 482 aaKnown RBP16.74■□□□□ 0.27
CCDC43-202ENST00000457422 ADGRG6Q86SQ4 1221 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 SLC22A9Q8IVM8 553 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 OR52K2Q8NGK3 314 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 BLOC1S5Q8TDH9 187 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 ANKRD49Q8WVL7 239 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 PLD4Q96BZ4 506 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 TBATAQ96M53 351 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 PSKH2Q96QS6 385 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 NACA2Q9H009 215 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 SEPT3Q9UH03 358 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 ARL5AQ9Y689 179 aa16.74■□□□□ 0.27
CCDC43-202ENST00000457422 ZFP37Q9Y6Q3 630 aaPredicted RBP16.74■□□□□ 0.27
CCDC43-202ENST00000457422 PQBP1O60828 265 aaKnown RBP16.73■□□□□ 0.27
CCDC43-202ENST00000457422 NDST3O95803 873 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 GLP2RO95838 553 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 OGNP20774 298 aaKnown RBP16.73■□□□□ 0.27
CCDC43-202ENST00000457422 ERFP50548 548 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 MTTPP55157 894 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 CDKN2DP55273 166 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 TBL3Q12788 808 aaKnown RBP16.73■□□□□ 0.27
CCDC43-202ENST00000457422 PTPRCAPQ14761 206 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 PDCD2Q16342 344 aaPredicted RBP16.73■□□□□ 0.27
CCDC43-202ENST00000457422 RNF168Q8IYW5 571 aaPredicted RBP16.73■□□□□ 0.27
CCDC43-202ENST00000457422 PPFIBP2Q8ND30 876 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 JADE3Q92613 823 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 FAR2Q96K12 515 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 DNAJC1Q96KC8 554 aaKnown RBP16.73■□□□□ 0.27
CCDC43-202ENST00000457422 ZNF512Q96ME7 567 aaPredicted RBP16.73■□□□□ 0.27
CCDC43-202ENST00000457422 SUDS3Q9H7L9 328 aaPredicted RBP16.73■□□□□ 0.27
CCDC43-202ENST00000457422 CYP4F11Q9HBI6 524 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 MICAL3Q7RTP6 2002 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 ZNF840PA6NDX5 716 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 TMEM233B4DJY2 109 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 BUD23O43709 281 aaKnown RBP16.73■□□□□ 0.27
CCDC43-202ENST00000457422 CLDN11O75508 207 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 GOT2P00505 430 aaKnown RBP16.73■□□□□ 0.27
CCDC43-202ENST00000457422 CXCL10P02778 98 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 KCNA5P22460 613 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 FDXRP22570 491 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 SP100P23497 879 aaPredicted RBP16.73■□□□□ 0.27
CCDC43-202ENST00000457422 OR1D2P34982 312 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 SUOXP51687 545 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 RFTN1Q14699 578 aaPredicted RBP16.73■□□□□ 0.27
CCDC43-202ENST00000457422 USP41Q3LFD5 358 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 SH2D4BQ5SQS7 431 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 MRNIPQ6NTE8 343 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 TMEM207Q6UWW9 146 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 FBXW8Q8N3Y1 598 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 PRICKLE1Q96MT3 831 aaPredicted RBP16.73■□□□□ 0.27
CCDC43-202ENST00000457422 VN1R3Q9BXE9 311 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 POPDC3Q9HBV1 291 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 EML4Q9HC35 981 aaKnown RBP16.73■□□□□ 0.27
CCDC43-202ENST00000457422 CYP4F12Q9HCS2 524 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 HSFX1Q9UBD0 423 aa16.73■□□□□ 0.27
CCDC43-202ENST00000457422 G3BP2Q9UN86 482 aaKnown RBP16.73■□□□□ 0.27
CCDC43-202ENST00000457422 CD3EAPO15446 510 aaKnown RBP16.72■□□□□ 0.27
CCDC43-202ENST00000457422 KDELR3O43731 214 aa16.72■□□□□ 0.27
CCDC43-202ENST00000457422 PDE5AO76074 875 aa16.72■□□□□ 0.27
CCDC43-202ENST00000457422 PIRTP0C851 137 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms