RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 GATAD2AQ86YP4 633 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 ACRBPQ8NEB7 543 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 P3H4Q92791 437 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 LGMNQ99538 433 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 FERMT1Q9BQL6 677 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 DNAJC28Q9NX36 388 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 DNPEPQ9ULA0 475 aa23.29■■□□□ 1.32
CBX3-204ENST00000456948 CCDC66A2RUB6 948 aa23.28■■□□□ 1.32
CBX3-204ENST00000456948 MTSS1O43312 755 aa23.28■■□□□ 1.32
CBX3-204ENST00000456948 LDOC1O95751 146 aaPredicted RBP23.28■■□□□ 1.32
CBX3-204ENST00000456948 ALPPL2P10696 532 aa23.28■■□□□ 1.32
CBX3-204ENST00000456948 PEX5P50542 639 aa23.28■■□□□ 1.32
CBX3-204ENST00000456948 PFN3P60673 137 aa23.28■■□□□ 1.32
CBX3-204ENST00000456948 IFI35P80217 286 aaPredicted RBP23.28■■□□□ 1.32
CBX3-204ENST00000456948 FOXC1Q12948 553 aa23.28■■□□□ 1.32
CBX3-204ENST00000456948 TAZQ16635 292 aa23.28■■□□□ 1.32
CBX3-204ENST00000456948 CCDC181Q5TID7 509 aa23.28■■□□□ 1.32
CBX3-204ENST00000456948 ALG1LQ6GMV1 187 aa23.28■■□□□ 1.32
CBX3-204ENST00000456948 BTN2A2Q8WVV5 523 aa23.28■■□□□ 1.32
CBX3-204ENST00000456948 GOLPH3Q9H4A6 298 aa23.28■■□□□ 1.32
CBX3-204ENST00000456948 RCCD1A6NED2 376 aa23.27■■□□□ 1.32
CBX3-204ENST00000456948 KCNK1O00180 336 aa23.27■■□□□ 1.32
CBX3-204ENST00000456948 PRKCGP05129 697 aa23.27■■□□□ 1.32
CBX3-204ENST00000456948 VIPR1P32241 457 aa23.27■■□□□ 1.32
CBX3-204ENST00000456948 CTNNA1P35221 906 aaKnown RBP23.27■■□□□ 1.32
CBX3-204ENST00000456948 RPL26P61254 145 aaKnown RBP23.27■■□□□ 1.32
CBX3-204ENST00000456948 BNIP3Q12983 259 aa23.27■■□□□ 1.32
CBX3-204ENST00000456948 ACOX1Q15067 660 aa23.27■■□□□ 1.32
CBX3-204ENST00000456948 SHBQ15464 509 aa23.27■■□□□ 1.32
CBX3-204ENST00000456948 PPP2R5EQ16537 467 aa23.27■■□□□ 1.32
CBX3-204ENST00000456948 LIPIQ6XZB0 460 aa23.27■■□□□ 1.32
CBX3-204ENST00000456948 EID2Q8N6I1 236 aa23.27■■□□□ 1.32
CBX3-204ENST00000456948 TP53I13Q8NBR0 393 aaPredicted RBP23.27■■□□□ 1.32
CBX3-204ENST00000456948 CCDC112Q8NEF3 446 aa23.27■■□□□ 1.32
CBX3-204ENST00000456948 TFB1MQ8WVM0 346 aaKnown RBP23.27■■□□□ 1.32
CBX3-204ENST00000456948 SCRN2Q96FV2 425 aa23.27■■□□□ 1.32
CBX3-204ENST00000456948 SEPT10Q9P0V9 454 aa23.27■■□□□ 1.32
CBX3-204ENST00000456948 RPL26L1Q9UNX3 145 aaKnown RBP23.27■■□□□ 1.32
CBX3-204ENST00000456948 COQ6Q9Y2Z9 468 aa23.27■■□□□ 1.32
CBX3-204ENST00000456948 REXO2Q9Y3B8 237 aaKnown RBP23.27■■□□□ 1.32
CBX3-204ENST00000456948 PCDHA3Q9Y5H8 950 aa23.27■■□□□ 1.32
CBX3-204ENST00000456948 DUSP10Q9Y6W6 482 aa23.27■■□□□ 1.32
CBX3-204ENST00000456948 CDK4P11802 303 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 BLKP51451 505 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 RWDD2BP57060 319 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 DSC2Q02487 901 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 TRAF2Q12933 501 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 TMEM139Q8IV31 216 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 SLC22A18ASQ8N1D0 253 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.26■■□□□ 1.31
CBX3-204ENST00000456948 UBL4BQ8N7F7 174 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 BAHD1Q8TBE0 780 aaPredicted RBP23.26■■□□□ 1.31
CBX3-204ENST00000456948 UBE2Q2Q8WVN8 375 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 OLFM3Q96PB7 478 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 IL12RB2Q99665 862 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 TSGA10Q9BZW7 698 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 LACRTQ9GZZ8 138 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 GPR27Q9NS67 375 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 EVA1BQ9NVM1 165 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 B4GALT6Q9UBX8 382 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 SALL4Q9UJQ4 1053 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 AMFRQ9UKV5 643 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 BTBD3Q9Y2F9 522 aa23.26■■□□□ 1.31
CBX3-204ENST00000456948 PSMD11O00231 422 aa23.25■■□□□ 1.31
CBX3-204ENST00000456948 RECQL5O94762 991 aaPredicted RBP23.25■■□□□ 1.31
CBX3-204ENST00000456948 CSF2P04141 144 aa23.25■■□□□ 1.31
CBX3-204ENST00000456948 HLA-DQB2P05538 268 aa23.25■■□□□ 1.31
CBX3-204ENST00000456948 PTMAP06454 111 aaKnown RBP23.25■■□□□ 1.31
CBX3-204ENST00000456948 FTH1P19P0C7X4 201 aa23.25■■□□□ 1.31
CBX3-204ENST00000456948 IGFALSP35858 605 aa23.25■■□□□ 1.31
CBX3-204ENST00000456948 SHC2P98077 582 aa23.25■■□□□ 1.31
CBX3-204ENST00000456948 RALGDSQ12967 914 aa23.25■■□□□ 1.31
CBX3-204ENST00000456948 MTM1Q13496 603 aa23.25■■□□□ 1.31
CBX3-204ENST00000456948 FZD2Q14332 565 aa23.25■■□□□ 1.31
CBX3-204ENST00000456948 IRF4Q15306 451 aa23.25■■□□□ 1.31
CBX3-204ENST00000456948 WSCD2Q2TBF2 565 aa23.25■■□□□ 1.31
CBX3-204ENST00000456948 NPNTQ6UXI9 565 aa23.25■■□□□ 1.31
CBX3-204ENST00000456948 PEX26Q7Z412 305 aa23.25■■□□□ 1.31
CBX3-204ENST00000456948 CNDP2Q96KP4 475 aaKnown RBP23.25■■□□□ 1.31
CBX3-204ENST00000456948 DUSP23Q9BVJ7 150 aa23.25■■□□□ 1.31
CBX3-204ENST00000456948 ADGRE3Q9BY15 652 aa23.25■■□□□ 1.31
CBX3-204ENST00000456948 MBNL1Q9NR56 388 aaKnown RBP23.25■■□□□ 1.31
CBX3-204ENST00000456948 EFR3BQ9Y2G0 817 aa23.25■■□□□ 1.31
CBX3-204ENST00000456948 PPIL1Q9Y3C6 166 aa23.25■■□□□ 1.31
CBX3-204ENST00000456948 hCG_1818297A0A087WSY0 165 aa23.24■■□□□ 1.31
CBX3-204ENST00000456948 MACROD2A1Z1Q3 448 aa23.24■■□□□ 1.31
CBX3-204ENST00000456948 A8MX80 341 aa23.24■■□□□ 1.31
CBX3-204ENST00000456948 PDE2AO00408 941 aaPredicted RBP23.24■■□□□ 1.31
CBX3-204ENST00000456948 SDC3O75056 442 aa23.24■■□□□ 1.31
CBX3-204ENST00000456948 NME1P15531 152 aaKnown RBP23.24■■□□□ 1.31
CBX3-204ENST00000456948 JUNDP17535 347 aa23.24■■□□□ 1.31
CBX3-204ENST00000456948 KELP23276 732 aa23.24■■□□□ 1.31
CBX3-204ENST00000456948 DGKAP23743 735 aa23.24■■□□□ 1.31
CBX3-204ENST00000456948 CTNNA2P26232 953 aa23.24■■□□□ 1.31
CBX3-204ENST00000456948 TNNT3P45378 269 aaPredicted RBP23.24■■□□□ 1.31
CBX3-204ENST00000456948 SEMG2Q02383 582 aa23.24■■□□□ 1.31
CBX3-204ENST00000456948 INPP5AQ14642 412 aa23.24■■□□□ 1.31
CBX3-204ENST00000456948 CCDC70Q6NSX1 233 aa23.24■■□□□ 1.31
CBX3-204ENST00000456948 MACC1Q6ZN28 852 aa23.24■■□□□ 1.31
CBX3-204ENST00000456948 NT5DC3Q86UY8 548 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms