RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 TAS2R39P59534 338 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 ATP6V0D1P61421 351 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 PIGFQ07326 219 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 MXD4Q14582 209 aaPredicted RBP10.36□□□□□ -0.75
CLIP4-208ENST00000456385 STXBP2Q15833 593 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 PHKG1Q16816 387 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 PYCR3Q53H96 274 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 OTUD3Q5T2D3 398 aaPredicted RBP10.36□□□□□ -0.75
CLIP4-208ENST00000456385 TMTC4Q5T4D3 741 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 FAM72AQ5TYM5 149 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 IRAK1BP1Q5VVH5 260 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 FAM72DQ6L9T8 149 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 ZNF773Q6PK81 442 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 DSG4Q86SJ6 1040 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 ITIH5Q86UX2 942 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 FAM72BQ86X60 149 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 AQP12AQ8IXF9 295 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 COLGALT2Q8IYK4 626 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 PNPLA1Q8N8W4 532 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 CCDC97Q96F63 343 aaPredicted RBP10.36□□□□□ -0.75
CLIP4-208ENST00000456385 CCDC138Q96M89 665 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 OLFM1Q99784 485 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 KLHL25Q9H0H3 589 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 CXCL16Q9H2A7 254 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 RAD21L1Q9H4I0 556 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 LRRC4Q9HBW1 653 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 LTB4R2Q9NPC1 389 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 PTGDR2Q9Y5Y4 395 aa10.36□□□□□ -0.75
CLIP4-208ENST00000456385 A0A0J9YYE9 177 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 H0Y858 1186 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 PPEF2O14830 753 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 STMN1P16949 149 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 CYP2B6P20813 491 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 BDNFP23560 247 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 SHMT2P34897 504 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 SULT1E1P49888 294 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 APLP1P51693 650 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 CLCN3P51790 818 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 MBTD1Q05BQ5 628 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 CSHL1Q14406 222 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 SF3B4Q15427 424 aaKnown RBP eCLIP10.35□□□□□ -0.75
CLIP4-208ENST00000456385 FAM83EQ2M2I3 478 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 UGT3A2Q3SY77 523 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 GTF2IRD2BQ6EKJ0 949 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 USP51Q70EK9 711 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 GTF2IRD2Q86UP8 949 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 SMG8Q8ND04 991 aaKnown RBP10.35□□□□□ -0.75
CLIP4-208ENST00000456385 TRPV3Q8NET8 790 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 RAB2BQ8WUD1 216 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 ZNF347Q96SE7 839 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 BEGAINQ9BUH8 593 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 TPK1Q9H3S4 243 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 TLR9Q9NR96 1032 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 SETD4Q9NVD3 440 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 KIAA1257Q9ULG3 409 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 ZNF638Q14966 1978 aaKnown RBP10.35□□□□□ -0.75
CLIP4-208ENST00000456385 TTC24A2A3L6 582 aaPredicted RBP10.35□□□□□ -0.75
CLIP4-208ENST00000456385 AURKAO14965 403 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 RSL1D1O76021 490 aaKnown RBP10.35□□□□□ -0.75
CLIP4-208ENST00000456385 CYP2C9P11712 490 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 GFAPP14136 432 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 NFKB1P19838 968 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 CAPN3P20807 821 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 GPX3P22352 226 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 EEF1DP29692 281 aaKnown RBP10.35□□□□□ -0.75
CLIP4-208ENST00000456385 RFC2P35250 354 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 SCN4AP35499 1836 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 HADHAP40939 763 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 ADARB1P78563 741 aaKnown RBP10.35□□□□□ -0.75
CLIP4-208ENST00000456385 FRG1Q14331 258 aaKnown RBP10.35□□□□□ -0.75
CLIP4-208ENST00000456385 TMEM132DQ14C87 1099 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 KIF19Q2TAC6 998 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 THOC7Q6I9Y2 204 aaKnown RBP10.35□□□□□ -0.75
CLIP4-208ENST00000456385 LARP4Q71RC2 724 aaKnown RBP eCLIP10.35□□□□□ -0.75
CLIP4-208ENST00000456385 DEFB106AQ8N104 65 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 DNERQ8NFT8 737 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 ELMO2Q96JJ3 720 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 DGCR6LQ9BY27 220 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 GBA3Q9H227 469 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 ADNPQ9H2P0 1102 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 SNX25Q9H3E2 840 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 SMARCAD1Q9H4L7 1026 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 GPN2Q9H9Y4 310 aaPredicted RBP10.35□□□□□ -0.75
CLIP4-208ENST00000456385 POLE4Q9NR33 117 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 RNF19AQ9NV58 838 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 DPP3Q9NY33 737 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.35□□□□□ -0.75
CLIP4-208ENST00000456385 ABCD2Q9UBJ2 740 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 WARS2Q9UGM6 360 aaKnown RBP10.35□□□□□ -0.75
CLIP4-208ENST00000456385 SEPT3Q9UH03 358 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 TNFSF13BQ9Y275 285 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 VWA7Q9Y334 891 aa10.35□□□□□ -0.75
CLIP4-208ENST00000456385 MAGED1Q9Y5V3 778 aaPredicted RBP10.35□□□□□ -0.75
CLIP4-208ENST00000456385 A8MT66 165 aa10.34□□□□□ -0.75
CLIP4-208ENST00000456385 CLDN25C9JDP6 229 aa10.34□□□□□ -0.75
CLIP4-208ENST00000456385 FXYD1O00168 92 aa10.34□□□□□ -0.75
CLIP4-208ENST00000456385 BCAS1O75363 584 aaPredicted RBP10.34□□□□□ -0.75
CLIP4-208ENST00000456385 MYO1DO94832 1006 aa10.34□□□□□ -0.75
CLIP4-208ENST00000456385 SLC6A2P23975 617 aa10.34□□□□□ -0.75
CLIP4-208ENST00000456385 ATP5F1P24539 256 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms