RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	KRT10	P13645	584 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	ADRB3	P13945	408 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	MX2	P20592	715 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	CCNC	P24863	283 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	CD27	P26842	260 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	ECHS1	P30084	290 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	NEK3	P51956	506 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	PPP2CB	P62714	309 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	PPP2CA	P67775	309 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	IRX4	P78413	519 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	PTK6	Q13882	451 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	HNRNPD	Q14103	355 aa	Known RBP	10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	TFDP3	Q5H9I0	405 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	ZFYVE27	Q5T4F4	411 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	NEK5	Q6P3R8	708 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	GDPD4	Q6W3E5	623 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	TRIM69	Q86WT6	500 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	RYBP	Q8N488	228 aa	Predicted RBP	10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	ATL2	Q8NHH9	583 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	CEP76	Q8TAP6	659 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	HCAR2	Q8TDS4	363 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	HDAC11	Q96DB2	347 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	ECHDC3	Q96DC8	303 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	PPP1R16A	Q96I34	528 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	MRGPRX2	Q96LB1	330 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	ZNF641	Q96N77	438 aa	Predicted RBP	10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	KLHL32	Q96NJ5	620 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	TUBGCP5	Q96RT8	1024 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	RUFY1	Q96T51	708 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	MGME1	Q9BQP7	344 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	CINP	Q9BW66	212 aa	Predicted RBP	10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	TSPYL1	Q9H0U9	437 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	PREB	Q9HCU5	417 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	WHRN	Q9P202	907 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	DKK3	Q9UBP4	350 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	MTRF1L	Q9UGC7	380 aa	Known RBP	10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	EIF2B4	Q9UI10	523 aa	Known RBP	10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	FADS3	Q9Y5Q0	445 aa		10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	10.04	□□□□□ -0.8
CHEK2-221	ENST00000456369	hCG_1818297	A0A087WSY0	165 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	TBC1D3D	A0A087WVF3	549 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	TBC1D3I	A0A087WXS9	549 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	TBC1D3E	A0A087X179	549 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	TBC1D3K	A0A087X1G2	549 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369		A0A1W2PPC4	97 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	ESYT3	A0FGR9	886 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	TBC1D3F	A6NER0	549 aa	Predicted RBP	10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	MEI4	A8MW99	385 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	TBC1D3L	B9A6J9	549 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	TRAFD1	O14545	582 aa	Predicted RBP	10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	WNT9A	O14904	365 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	AREL1	O15033	823 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	KHNYN	O15037	678 aa	Known RBP	10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	AP1G1	O43747	822 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	FSBP	O95073	299 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	PIGN	O95427	931 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	TBC1D3H	P0C7X1	549 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	TIMP2	P16035	220 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	ZFX	P17010	805 aa	Predicted RBP	10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	OAS2	P29728	719 aa	Known RBP	10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	ABL2	P42684	1182 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	RENBP	P51606	427 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	AP1S1	P61966	158 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	MRPS25	P82663	173 aa	Known RBP	10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	PRR20E	P86478	221 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	PRR20C	P86479	221 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	PRR20D	P86480	221 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	PRR20B	P86481	221 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	PRR20A	P86496	221 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	CAV1	Q03135	178 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	PPID	Q08752	370 aa	Known RBP	10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	CCDC15	Q0P6D6	951 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	IHH	Q14623	411 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	GRM3	Q14832	879 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	LAPTM4A	Q15012	233 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	DUOXA1	Q1HG43	343 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	ZNF284	Q2VY69	593 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	TRIM61	Q5EBN2	209 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	CFAP58	Q5T655	872 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	MARC1	Q5VT66	337 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	TBC1D3G	Q6DHY5	549 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	ALG1L	Q6GMV1	187 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	TBC1D3C	Q6IPX1	549 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	TTC27	Q6P3X3	843 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	FBXL19	Q6PCT2	694 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	NPNT	Q6UXI9	565 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	LRIG3	Q6UXM1	1119 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	CEP128	Q6ZU80	1094 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	ADAT2	Q7Z6V5	191 aa	Known RBP	10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	SRL	Q86TD4	932 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	ZSWIM9	Q86XI8	627 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	CAMK1D	Q8IU85	385 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	TBC1D3	Q8IZP1	549 aa	Predicted RBP	10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	CYP4X1	Q8N118	509 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	BBOF1	Q8ND07	529 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	FMO2	Q99518	471 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	LGMN	Q99538	433 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	HERPUD2	Q9BSE4	406 aa		10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	MAK16	Q9BXY0	300 aa	Known RBP	10.03	□□□□□ -0.8
CHEK2-221	ENST00000456369	DYRK4	Q9NR20	520 aa		10.03	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms