RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 SP140LQ9H930 580 aa7.69□□□□□ -1.18
HDAC9-218ENST00000456174 AKIP1Q9NQ31 210 aa7.69□□□□□ -1.18
HDAC9-218ENST00000456174 CACNG4Q9UBN1 327 aa7.69□□□□□ -1.18
HDAC9-218ENST00000456174 A0A0U1RQF3 1178 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 C1orf232A0A0U1RR37 186 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 A0A1W2PQ45 241 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-218ENST00000456174 A0A1W2PQY0 241 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 PI4K2BG5E9Z4 385 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 hCG_2039718K7EN88 272 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 ASNA1O43681 348 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 LRCH4O75427 683 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 BCL10O95999 233 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 CKBP12277 381 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 CCNA2P20248 432 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 ITGAXP20702 1163 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 BGNP21810 368 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 CLCNKBP51801 687 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 NKX2-5P52952 324 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-218ENST00000456174 TMBIM6P55061 237 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 CDH15P55291 814 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 SNX16P57768 344 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 COX10Q12887 443 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 MAPRE1Q15691 268 aaKnown RBP7.68□□□□□ -1.18
HDAC9-218ENST00000456174 ATG16L1Q676U5 607 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 TXNRD3NBQ6F5E7 133 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 FAM171BQ6P995 826 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 TMEM26Q6ZUK4 368 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 POLNQ7Z5Q5 900 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 DSG4Q86SJ6 1040 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 HPS6Q86YV9 775 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 HERC6Q8IVU3 1022 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 SAMD14Q8IZD0 417 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-218ENST00000456174 TMEM102Q8N9M5 508 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-218ENST00000456174 ANKRD53Q8N9V6 530 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 ANKRD52Q8NB46 1076 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 MARVELD3Q96A59 401 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 CCDC124Q96CT7 223 aaKnown RBP7.68□□□□□ -1.18
HDAC9-218ENST00000456174 CFAP36Q96G28 342 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 SH3YL1Q96HL8 342 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-218ENST00000456174 SLITRK1Q96PX8 696 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 SLC4A5Q9BY07 1137 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 SCPEP1Q9HB40 452 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 HMG20AQ9NP66 347 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 ANLNQ9NQW6 1124 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 STARD7Q9NQZ5 370 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 KLQ9UEF7 1012 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 ARHGAP26Q9UNA1 814 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 TESMINQ9Y4I5 508 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 PCM1Q15154 2024 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 C7orf72A4D263 438 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 OR5K4A6NMS3 321 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 MTSS1O43312 755 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 NOL3O60936 208 aaKnown RBP7.68□□□□□ -1.18
HDAC9-218ENST00000456174 NTRK1P04629 796 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 UGT2B4P06133 528 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 CDH1P12830 882 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 RRM2P31350 389 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 GRIK1P39086 918 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 OPRL1P41146 370 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 BCAT1P54687 386 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 MLLT10P55197 1068 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 PRMT2P55345 433 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 SLC25A11Q02978 314 aaKnown RBP7.68□□□□□ -1.18
HDAC9-218ENST00000456174 BST2Q10589 180 aaKnown RBP7.68□□□□□ -1.18
HDAC9-218ENST00000456174 TRAF2Q12933 501 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 KLF1Q13351 362 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-218ENST00000456174 RAB39AQ14964 217 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 HADHQ16836 314 aaKnown RBP7.68□□□□□ -1.18
HDAC9-218ENST00000456174 GPR107Q5VW38 600 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 WSCD1Q658N2 575 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 KRT80Q6KB66 452 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 UGT3A1Q6NUS8 523 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 MFSD7Q6UXD7 560 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 C11orf96Q7Z7L8 435 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 SCUBE3Q8IX30 993 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 COLGALT2Q8IYK4 626 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 SIX6OS1Q8N1H7 587 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 LILRB2Q8N423 598 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 FAM109AQ8N4B1 249 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 ARFGAP1Q8N6T3 406 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 HIPK4Q8NE63 616 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 ATG4AQ8WYN0 398 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 DLG3Q92796 817 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 ACSF2Q96CM8 615 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-218ENST00000456174 SLC39A13Q96H72 371 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 PIWIL1Q96J94 861 aaKnown RBP7.68□□□□□ -1.18
HDAC9-218ENST00000456174 FEM1CQ96JP0 617 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 SENP8Q96LD8 212 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 STN1Q9H668 368 aaKnown RBP7.68□□□□□ -1.18
HDAC9-218ENST00000456174 GPN2Q9H9Y4 310 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-218ENST00000456174 RSAD1Q9HA92 442 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 C8orf4Q9NR00 106 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 DIABLOQ9NR28 239 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 CHST7Q9NS84 486 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 ASNSD1Q9NWL6 643 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 ENPP5Q9UJA9 477 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 POLHQ9Y253 713 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 PCDHGB3Q9Y5G1 929 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 BRCA2P51587 3418 aa7.68□□□□□ -1.18
HDAC9-218ENST00000456174 CASTOR2A6NHX0 329 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms