RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 MAGEC1O60732 1142 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 MMP20O60882 483 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 PAK4O96013 591 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-205ENST00000454542 PRLP01236 227 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 CSRP1P21291 193 aaKnown RBP14.24□□□□□ -0.13
HDAC4-205ENST00000454542 LHCGRP22888 699 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 RXRGP48443 463 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 CCT8P50990 548 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 PFN3P60673 137 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 RPL26P61254 145 aaKnown RBP14.24□□□□□ -0.13
HDAC4-205ENST00000454542 STAT4Q14765 748 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 CNGA3Q16281 694 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 TEX44Q53QW1 395 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 ARMC12Q5T9G4 340 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 LIPIQ6XZB0 460 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 CBARPQ8N350 705 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-205ENST00000454542 OXR1Q8N573 874 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 OR13H1Q8NG92 308 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 ACTL9Q8TC94 416 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 HAUS1Q96CS2 278 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 IMP4Q96G21 291 aaKnown RBP14.24□□□□□ -0.13
HDAC4-205ENST00000454542 TEKT5Q96M29 485 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 ELF4Q99607 663 aaPredicted RBP14.24□□□□□ -0.13
HDAC4-205ENST00000454542 MYOCQ99972 504 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 WRAP53Q9BUR4 548 aaKnown RBP14.24□□□□□ -0.13
HDAC4-205ENST00000454542 HEMGNQ9BXL5 484 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 CEP41Q9BYV8 373 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 SLC25A51Q9H1U9 297 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 GDF3Q9NR23 364 aa14.24□□□□□ -0.13
HDAC4-205ENST00000454542 RPL26L1Q9UNX3 145 aaKnown RBP14.24□□□□□ -0.13
HDAC4-205ENST00000454542 A0A0J9YYE9 177 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 POM121BA6NF01 834 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 NPIPB15A6NHN6 443 aaPredicted RBP14.23□□□□□ -0.13
HDAC4-205ENST00000454542 PSMD11O00231 422 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 YKT6O15498 198 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 PCDHGA12O60330 932 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 DFNA5O60443 496 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 HEXIM1O94992 359 aaKnown RBP14.23□□□□□ -0.13
HDAC4-205ENST00000454542 TRBC1P01850 177 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 PDHA1P08559 390 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 THEGLP0DJG4 465 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 CA4P22748 312 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 EPHA8P29322 1005 aaPredicted RBP14.23□□□□□ -0.13
HDAC4-205ENST00000454542 VIPR1P32241 457 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 CD68P34810 354 aaPredicted RBP14.23□□□□□ -0.13
HDAC4-205ENST00000454542 CD86P42081 329 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 RABIFP47224 123 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 LIG3P49916 1009 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 CLDN2P57739 230 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 OTUD4Q01804 1114 aaKnown RBP14.23□□□□□ -0.13
HDAC4-205ENST00000454542 ZNF211Q13398 564 aaPredicted RBP14.23□□□□□ -0.13
HDAC4-205ENST00000454542 IRF4Q15306 451 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 MEI1Q5TIA1 1274 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 KANSL1Q7Z3B3 1105 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 BAHD1Q8TBE0 780 aaPredicted RBP14.23□□□□□ -0.13
HDAC4-205ENST00000454542 SCRN2Q96FV2 425 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 COQ10AQ96MF6 247 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 TRIB3Q96RU7 358 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 LYSMD1Q96S90 227 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 VAT1Q99536 393 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 C1QTNF7Q9BXJ2 289 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 GLOD4Q9HC38 313 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 TM7SF3Q9NS93 570 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 COQ6Q9Y2Z9 468 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 TTLL3Q9Y4R7 772 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 SCN8AQ9UQD0 1980 aa14.23□□□□□ -0.13
HDAC4-205ENST00000454542 DCDC2BA2VCK2 349 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 CAPN8A6NHC0 703 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 TOR1BO14657 336 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 FPGTO14772 594 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 NEBLO76041 1014 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 TJP3O95049 919 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 ELFN1P0C7U0 828 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 CYP2A6P11509 494 aaPredicted RBP14.22□□□□□ -0.13
HDAC4-205ENST00000454542 NFKBIAP25963 317 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 CETN2P41208 172 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 SEMG2Q02383 582 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 ITKQ08881 620 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 SGCGQ13326 291 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 UAP1L1Q3KQV9 507 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 TPRG1LQ5T0D9 272 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 USP45Q70EL2 814 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 B4GALNT4Q76KP1 1039 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 ERMP1Q7Z2K6 904 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 PTAR1Q7Z6K3 402 aaPredicted RBP14.22□□□□□ -0.13
HDAC4-205ENST00000454542 ZC3H18Q86VM9 953 aaKnown RBP14.22□□□□□ -0.13
HDAC4-205ENST00000454542 DCP2Q8IU60 420 aaKnown RBP14.22□□□□□ -0.13
HDAC4-205ENST00000454542 PDCD6IPQ8WUM4 868 aaKnown RBP14.22□□□□□ -0.13
HDAC4-205ENST00000454542 HTR3CQ8WXA8 447 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 IFT43Q96FT9 208 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 KLHDC7BQ96G42 594 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 AGAP3Q96P47 875 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 ALS2CR12Q96Q35 445 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 PCDH9Q9HC56 1237 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 LZTFL1Q9NQ48 299 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 MBNL1Q9NR56 388 aaKnown RBP14.22□□□□□ -0.13
HDAC4-205ENST00000454542 SEPT10Q9P0V9 454 aa14.22□□□□□ -0.13
HDAC4-205ENST00000454542 FLRT2O43155 660 aa14.21□□□□□ -0.13
HDAC4-205ENST00000454542 CBFA2T3O75081 653 aa14.21□□□□□ -0.13
HDAC4-205ENST00000454542 ZNF189O75820 626 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms