RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 VAT1Q99536 393 aa20.19■□□□□ 0.82
PMPCB-205ENST00000453466 FOXP3Q9BZS1 431 aa20.19■□□□□ 0.82
PMPCB-205ENST00000453466 MIR1-1HGQ9H1L0 117 aa20.19■□□□□ 0.82
PMPCB-205ENST00000453466 SUV39H2Q9H5I1 410 aa20.19■□□□□ 0.82
PMPCB-205ENST00000453466 ATP13A3Q9H7F0 1226 aa20.19■□□□□ 0.82
PMPCB-205ENST00000453466 PREBQ9HCU5 417 aa20.19■□□□□ 0.82
PMPCB-205ENST00000453466 DKK3Q9UBP4 350 aa20.19■□□□□ 0.82
PMPCB-205ENST00000453466 EIF2B4Q9UI10 523 aaKnown RBP20.19■□□□□ 0.82
PMPCB-205ENST00000453466 ANAPC5Q9UJX4 755 aa20.19■□□□□ 0.82
PMPCB-205ENST00000453466 USP34Q70CQ2 3546 aa20.19■□□□□ 0.82
PMPCB-205ENST00000453466 FAM186AA6NE01 2351 aa20.19■□□□□ 0.82
PMPCB-205ENST00000453466 MUSKO15146 869 aa20.18■□□□□ 0.82
PMPCB-205ENST00000453466 CCNB1P14635 433 aa20.18■□□□□ 0.82
PMPCB-205ENST00000453466 TGM1P22735 817 aa20.18■□□□□ 0.82
PMPCB-205ENST00000453466 SERPINA4P29622 427 aa20.18■□□□□ 0.82
PMPCB-205ENST00000453466 VPS41P49754 854 aa20.18■□□□□ 0.82
PMPCB-205ENST00000453466 MORF4L2Q15014 288 aa20.18■□□□□ 0.82
PMPCB-205ENST00000453466 DUOXA1Q1HG43 343 aa20.18■□□□□ 0.82
PMPCB-205ENST00000453466 RALGPS1Q5JS13 557 aa20.18■□□□□ 0.82
PMPCB-205ENST00000453466 CFAP58Q5T655 872 aa20.18■□□□□ 0.82
PMPCB-205ENST00000453466 IZUMO3Q5VZ72 239 aa20.18■□□□□ 0.82
PMPCB-205ENST00000453466 HIBCHQ6NVY1 386 aaPredicted RBP20.18■□□□□ 0.82
PMPCB-205ENST00000453466 B4GALNT4Q76KP1 1039 aa20.18■□□□□ 0.82
PMPCB-205ENST00000453466 PARS2Q7L3T8 475 aaKnown RBP20.18■□□□□ 0.82
PMPCB-205ENST00000453466 TTC7BQ86TV6 843 aa20.18■□□□□ 0.82
PMPCB-205ENST00000453466 VOPP1Q96AW1 172 aa20.18■□□□□ 0.82
PMPCB-205ENST00000453466 FMO2Q99518 471 aa20.18■□□□□ 0.82
PMPCB-205ENST00000453466 NT5MQ9NPB1 228 aa20.18■□□□□ 0.82
PMPCB-205ENST00000453466 PARD6AQ9NPB6 346 aa20.18■□□□□ 0.82
PMPCB-205ENST00000453466 MTRF1LQ9UGC7 380 aaKnown RBP20.18■□□□□ 0.82
PMPCB-205ENST00000453466 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.17■□□□□ 0.82
PMPCB-205ENST00000453466 KHNYNO15037 678 aaKnown RBP20.17■□□□□ 0.82
PMPCB-205ENST00000453466 OPHN1O60890 802 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 IGHV4-34P06331 123 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 ITGA8P53708 1063 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 TAS2R38P59533 333 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 BCL2L1Q07817 233 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 WASHC5Q12768 1159 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 HOOK3Q86VS8 718 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 GSPT2Q8IYD1 628 aaKnown RBP20.17■□□□□ 0.82
PMPCB-205ENST00000453466 KIAA2013Q8IYS2 634 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 SPATA13Q96N96 652 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 NUDCD1Q96RS6 583 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 MGME1Q9BQP7 344 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 SCUBE2Q9NQ36 999 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 RBM22Q9NW64 420 aaKnown RBP eCLIP20.17■□□□□ 0.82
PMPCB-205ENST00000453466 GON4LQ3T8J9 2241 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 ATXN2Q99700 1313 aaKnown RBP20.17■□□□□ 0.82
PMPCB-205ENST00000453466 PRR5-ARHGAP8B1AHC4 643 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 ATP8B1O43520 1251 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 AP1G1O43747 822 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 PCDH8O95206 1070 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 PIGNO95427 931 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 FAM153BP0C7A2 387 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 XPAP23025 273 aaPredicted RBP20.17■□□□□ 0.82
PMPCB-205ENST00000453466 CES1P23141 567 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 CD27P26842 260 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 MAGEA6P43360 314 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 SUOXP51687 545 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 ITKQ08881 620 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 FAM153CQ494X1 144 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 RNASEH2BQ5TBB1 312 aaKnown RBP20.17■□□□□ 0.82
PMPCB-205ENST00000453466 PRPF39Q86UA1 669 aaKnown RBP20.17■□□□□ 0.82
PMPCB-205ENST00000453466 CAMK1DQ8IU85 385 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 PPIL6Q8IXY8 311 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 PGBD5Q8N414 524 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 MREGQ8N565 214 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 PAF1Q8N7H5 531 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 LRRN4Q8WUT4 740 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 FEM1CQ96JP0 617 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 NUSAP1Q9BXS6 441 aaKnown RBP20.17■□□□□ 0.82
PMPCB-205ENST00000453466 POLR1EQ9GZS1 481 aaKnown RBP20.17■□□□□ 0.82
PMPCB-205ENST00000453466 SMOC1Q9H4F8 434 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 FAM153AQ9UHL3 310 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 TRHDEQ9UKU6 1024 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 SHOC2Q9UQ13 582 aa20.17■□□□□ 0.82
PMPCB-205ENST00000453466 NYNRINQ9P2P1 1898 aaKnown RBP20.17■□□□□ 0.82
PMPCB-205ENST00000453466 A0A1B0GTW7 788 aa20.16■□□□□ 0.82
PMPCB-205ENST00000453466 NEMP1O14524 444 aa20.16■□□□□ 0.82
PMPCB-205ENST00000453466 CFIP05156 583 aa20.16■□□□□ 0.82
PMPCB-205ENST00000453466 CR2P20023 1033 aa20.16■□□□□ 0.82
PMPCB-205ENST00000453466 NUDT1P36639 197 aa20.16■□□□□ 0.82
PMPCB-205ENST00000453466 MAXP61244 160 aa20.16■□□□□ 0.82
PMPCB-205ENST00000453466 TRIM61Q5EBN2 209 aa20.16■□□□□ 0.82
PMPCB-205ENST00000453466 ANKRD20A2Q5SQ80 823 aa20.16■□□□□ 0.82
PMPCB-205ENST00000453466 ANKRD20A1Q5TYW2 823 aa20.16■□□□□ 0.82
PMPCB-205ENST00000453466 ANKRD20A3Q5VUR7 823 aa20.16■□□□□ 0.82
PMPCB-205ENST00000453466 SLC23A3Q6PIS1 610 aa20.16■□□□□ 0.82
PMPCB-205ENST00000453466 BRAT1Q6PJG6 821 aa20.16■□□□□ 0.82
PMPCB-205ENST00000453466 PRR23CQ6ZRP0 262 aa20.16■□□□□ 0.82
PMPCB-205ENST00000453466 TRIM69Q86WT6 500 aa20.16■□□□□ 0.82
PMPCB-205ENST00000453466 SLC6A14Q9UN76 642 aa20.16■□□□□ 0.82
PMPCB-205ENST00000453466 FADS3Q9Y5Q0 445 aa20.16■□□□□ 0.82
PMPCB-205ENST00000453466 NUMA1Q14980 2115 aa20.15■□□□□ 0.82
PMPCB-205ENST00000453466 A0A1W2PPC4 97 aa20.15■□□□□ 0.82
PMPCB-205ENST00000453466 C10orf142B7Z368 130 aa20.15■□□□□ 0.82
PMPCB-205ENST00000453466 BCAT2O15382 392 aaPredicted RBP20.15■□□□□ 0.82
PMPCB-205ENST00000453466 TSPAN6O43657 245 aa20.15■□□□□ 0.82
PMPCB-205ENST00000453466 RNGTTO60942 597 aaKnown RBP20.15■□□□□ 0.82
PMPCB-205ENST00000453466 JCHAINP01591 159 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms