RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 SRSF6Q13247 344 aaKnown RBP11.75□□□□□ -0.53
GARNL3-210ENST00000453030 MTM1Q13496 603 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 GRM3Q14832 879 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 TGIF1Q15583 401 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 DCUN1D2Q6PH85 259 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 BRAT1Q6PJG6 821 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 LVRNQ6Q4G3 990 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 CCNJLQ8IV13 435 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 SFTPA2Q8IWL1 248 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 Q8N9G6 341 aaPredicted RBP11.75□□□□□ -0.53
GARNL3-210ENST00000453030 TSEN2Q8NCE0 465 aaKnown RBP11.75□□□□□ -0.53
GARNL3-210ENST00000453030 ATL2Q8NHH9 583 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 OR1E3Q8WZA6 343 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 CCNL2Q96S94 520 aaPredicted RBP11.75□□□□□ -0.53
GARNL3-210ENST00000453030 RBM15Q96T37 977 aaKnown RBP eCLIP11.75□□□□□ -0.53
GARNL3-210ENST00000453030 CNPY3Q9BT09 278 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 LRRN3Q9H3W5 708 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 DHX35Q9H5Z1 703 aaKnown RBP11.75□□□□□ -0.53
GARNL3-210ENST00000453030 LRRC19Q9H756 370 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 ATP13A3Q9H7F0 1226 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 SUDS3Q9H7L9 328 aaPredicted RBP11.75□□□□□ -0.53
GARNL3-210ENST00000453030 SP110Q9HB58 689 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 FGF22Q9HCT0 170 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 MRPL40Q9NQ50 206 aaKnown RBP11.75□□□□□ -0.53
GARNL3-210ENST00000453030 FANCLQ9NW38 375 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 ATXN7L1Q9ULK2 861 aaPredicted RBP11.75□□□□□ -0.53
GARNL3-210ENST00000453030 AP4E1Q9UPM8 1137 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 LOXL2Q9Y4K0 774 aa11.75□□□□□ -0.53
GARNL3-210ENST00000453030 NAV2Q8IVL1 2488 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 TMEM202A6NGA9 273 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 LGALS16A8MUM7 142 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 B8ZZF3 427 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 CACNB4O00305 520 aaPredicted RBP11.74□□□□□ -0.53
GARNL3-210ENST00000453030 EEF2KO00418 725 aaKnown RBP11.74□□□□□ -0.53
GARNL3-210ENST00000453030 ATMINO43313 823 aaPredicted RBP11.74□□□□□ -0.53
GARNL3-210ENST00000453030 SLC28A2O43868 658 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 RECQL5O94762 991 aaPredicted RBP11.74□□□□□ -0.53
GARNL3-210ENST00000453030 TNFP01375 233 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 DESP17661 470 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 ITIH1P19827 911 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 SERPINA4P29622 427 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 PAPOLAP51003 745 aaKnown RBP11.74□□□□□ -0.53
GARNL3-210ENST00000453030 AIF1P55008 147 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 RALGDSQ12967 914 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 EIF3IQ13347 325 aaKnown RBP11.74□□□□□ -0.53
GARNL3-210ENST00000453030 CA9Q16790 459 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 CT47A1Q5JQC4 288 aaPredicted RBP11.74□□□□□ -0.53
GARNL3-210ENST00000453030 PPP1R15BQ5SWA1 713 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 TAF8Q7Z7C8 310 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 FAM46DQ8NEK8 389 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 OR56A4Q8NGH8 313 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 FUBP1Q96AE4 644 aaKnown RBP11.74□□□□□ -0.53
GARNL3-210ENST00000453030 MED8Q96G25 268 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 ZNF641Q96N77 438 aaPredicted RBP11.74□□□□□ -0.53
GARNL3-210ENST00000453030 TMEM74Q96NL1 305 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 TUBGCP5Q96RT8 1024 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 AGPAT1Q99943 283 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 CINPQ9BW66 212 aaPredicted RBP11.74□□□□□ -0.53
GARNL3-210ENST00000453030 SLC39A8Q9C0K1 460 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 MOSPD1Q9UJG1 213 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 PCDHGA7Q9Y5G6 932 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 PTPN13Q12923 2485 aa11.74□□□□□ -0.53
GARNL3-210ENST00000453030 ARHGAP42A6NI28 874 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 A8MX80 341 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 TMCO5BA8MYB1 307 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 DFFAO00273 331 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 PALMO75781 387 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 PSMA2P25787 234 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 CCKBRP32239 447 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 NDST2P52849 883 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 KIAA1024LP59773 190 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 UBXN1Q04323 297 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 BCL2L1Q07817 233 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 AGERQ15109 404 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 MAP9Q49MG5 647 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 CERCAMQ5T4B2 595 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 PHF19Q5T6S3 580 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 ARHGAP36Q6ZRI8 547 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 PRICKLE2Q7Z3G6 844 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 SPRED1Q7Z699 444 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 SRLQ86TD4 932 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 VASH2Q86V25 355 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 MCOLN2Q8IZK6 566 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 PELI3Q8N2H9 469 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 NPWQ8N729 165 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 ANKRD20A12PQ8NF67 263 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 GPR156Q8NFN8 814 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 OR6C4Q8NGE1 309 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 CCL4L1Q8NHW4 92 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 HCAR2Q8TDS4 363 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 PEBP4Q96S96 227 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 KCTD15Q96SI1 283 aaPredicted RBP11.73□□□□□ -0.53
GARNL3-210ENST00000453030 SNRNP25Q9BV90 132 aaKnown RBP11.73□□□□□ -0.53
GARNL3-210ENST00000453030 TMEM168Q9H0V1 697 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 DPEP2Q9H4A9 486 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 WDR26Q9H7D7 661 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 CYP4F12Q9HCS2 524 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 TAS2R14Q9NYV8 317 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 PCSK1NQ9UHG2 260 aa11.73□□□□□ -0.53
GARNL3-210ENST00000453030 DGKBQ9Y6T7 804 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms