RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 CDH6P55285 790 aa12.96□□□□□ -0.33
CHD3-206ENST00000452447 AGERQ15109 404 aa12.96□□□□□ -0.33
CHD3-206ENST00000452447 ELOCQ15369 112 aa12.96□□□□□ -0.33
CHD3-206ENST00000452447 NR0B2Q15466 257 aa12.96□□□□□ -0.33
CHD3-206ENST00000452447 COL28A1Q2UY09 1125 aa12.96□□□□□ -0.33
CHD3-206ENST00000452447 SKOR2Q2VWA4 1001 aaPredicted RBP12.96□□□□□ -0.33
CHD3-206ENST00000452447 TXNRD3NBQ6F5E7 133 aa12.96□□□□□ -0.33
CHD3-206ENST00000452447 RD3Q7Z3Z2 195 aa12.96□□□□□ -0.33
CHD3-206ENST00000452447 FSTL5Q8N475 847 aaPredicted RBP12.96□□□□□ -0.33
CHD3-206ENST00000452447 PDCD6IPQ8WUM4 868 aaKnown RBP12.96□□□□□ -0.33
CHD3-206ENST00000452447 SCG3Q8WXD2 468 aaKnown RBP12.96□□□□□ -0.33
CHD3-206ENST00000452447 APOOQ9BUR5 198 aa12.96□□□□□ -0.33
CHD3-206ENST00000452447 PCDH18Q9HCL0 1135 aa12.96□□□□□ -0.33
CHD3-206ENST00000452447 OR1A2Q9Y585 309 aa12.96□□□□□ -0.33
CHD3-206ENST00000452447 U3KQA8 63 aa12.96□□□□□ -0.33
CHD3-206ENST00000452447 KIF26BQ2KJY2 2108 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 EME2A4GXA9 379 aaPredicted RBP12.95□□□□□ -0.34
CHD3-206ENST00000452447 CACNB4O00305 520 aaPredicted RBP12.95□□□□□ -0.34
CHD3-206ENST00000452447 TRAFD1O14545 582 aaPredicted RBP12.95□□□□□ -0.34
CHD3-206ENST00000452447 YY2O15391 372 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 MAFKO60675 156 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 SOCS5O75159 536 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 RECQL5O94762 991 aaPredicted RBP12.95□□□□□ -0.34
CHD3-206ENST00000452447 RASGRP1O95267 797 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 ALPIP09923 528 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 TSHRP16473 764 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 HK3P52790 923 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 SLC25A11Q02978 314 aaKnown RBP12.95□□□□□ -0.34
CHD3-206ENST00000452447 MTM1Q13496 603 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 NFATC4Q14934 902 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 C6orf132Q5T0Z8 1188 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 MARC1Q5VT66 337 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 ESRP1Q6NXG1 681 aaKnown RBP12.95□□□□□ -0.34
CHD3-206ENST00000452447 GUSBP11Q6P575 273 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 LIPIQ6XZB0 460 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 DPPA4Q7L190 304 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 EFL1Q7Z2Z2 1120 aaKnown RBP12.95□□□□□ -0.34
CHD3-206ENST00000452447 TPCN2Q8NHX9 752 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 ZNF564Q8TBZ8 553 aaPredicted RBP12.95□□□□□ -0.34
CHD3-206ENST00000452447 TSACCQ96A04 125 aaPredicted RBP12.95□□□□□ -0.34
CHD3-206ENST00000452447 NUDCD1Q96RS6 583 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 BOCQ9BWV1 1114 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 XPO4Q9C0E2 1151 aaKnown RBP12.95□□□□□ -0.34
CHD3-206ENST00000452447 CTTNBP2NLQ9P2B4 639 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 RCOR3Q9P2K3 495 aaPredicted RBP12.95□□□□□ -0.34
CHD3-206ENST00000452447 PNMA8BQ9ULN7 279 aaPredicted RBP12.95□□□□□ -0.34
CHD3-206ENST00000452447 PCDHGC4Q9Y5F7 938 aa12.95□□□□□ -0.34
CHD3-206ENST00000452447 SMG1Q96Q15 3661 aaKnown RBP12.95□□□□□ -0.34
CHD3-206ENST00000452447 A0A087WV48 116 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 TTC24A2A3L6 582 aaPredicted RBP12.94□□□□□ -0.34
CHD3-206ENST00000452447 A8MX80 341 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 RRP8O43159 456 aaKnown RBP12.94□□□□□ -0.34
CHD3-206ENST00000452447 CBFA2T2O43439 604 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 BRINP1O60477 761 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 GJC1P36383 396 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 MMP13P45452 471 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 RALGDSQ12967 914 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 ACOX1Q15067 660 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 TCEA2Q15560 299 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 CDCP2Q5VXM1 449 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 LRRC69Q6ZNQ3 347 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 SDR16C5Q8N3Y7 309 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 CTNNBL1Q8WYA6 563 aaPredicted RBP12.94□□□□□ -0.34
CHD3-206ENST00000452447 FGF11Q92914 225 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 NAT6Q93015 286 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 WDR92Q96MX6 357 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 CLPBQ9H078 707 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 DEF6Q9H4E7 631 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 KLQ9UEF7 1012 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 PCDHB1Q9Y5F3 818 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 LRP4O75096 1905 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 USP12O75317 370 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 CSO75390 466 aaKnown RBP12.94□□□□□ -0.34
CHD3-206ENST00000452447 PEX11BO96011 259 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 CPP00450 1065 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 TNFP01375 233 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 H2AFZP0C0S5 128 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 CR2P20023 1033 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 TGM2P21980 687 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 KELP23276 732 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 HNRNPH3P31942 346 aaKnown RBP12.94□□□□□ -0.34
CHD3-206ENST00000452447 ACTN2P35609 894 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 ABCG1P45844 678 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 SRP54P61011 504 aaKnown RBP12.94□□□□□ -0.34
CHD3-206ENST00000452447 MAXP61244 160 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 MMRN1Q13201 1228 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 TSR1Q2NL82 804 aaKnown RBP12.94□□□□□ -0.34
CHD3-206ENST00000452447 ALG11Q2TAA5 492 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 RALGPS1Q5JS13 557 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 LVRNQ6Q4G3 990 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 IGSF10Q6WRI0 2623 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 H2AFVQ71UI9 128 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 PDZD3Q86UT5 571 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 GKN2Q86XP6 184 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 LRRC49Q8IUZ0 686 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 SLC35F3Q8IY50 421 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 KCTD6Q8NC69 237 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 SPOCK2Q92563 424 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 MGME1Q9BQP7 344 aa12.94□□□□□ -0.34
CHD3-206ENST00000452447 NOD2Q9HC29 1040 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms