RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 HACD2Q6Y1H2 254 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 BEND4Q6ZU67 534 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 ZNF367Q7RTV3 350 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 KCTD20Q7Z5Y7 419 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 AMIGO1Q86WK6 493 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 SCML4Q8N228 414 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 MAGEE2Q8TD90 523 aaPredicted RBP2.21□□□□□ -2.05
USP53-202ENST00000450251 SLC22A17Q8WUG5 538 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 NXPE2Q96DL1 559 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 RNFT2Q96EX2 444 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 C11orf24Q96F05 449 aaPredicted RBP2.21□□□□□ -2.05
USP53-202ENST00000450251 C10orf90Q96M02 699 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 COG8Q96MW5 612 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 TM9SF2Q99805 663 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 C17orf62Q9BQA9 187 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 ADPGKQ9BRR6 497 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 TRMOQ9BU70 441 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 ZNF436Q9C0F3 470 aaPredicted RBP2.21□□□□□ -2.05
USP53-202ENST00000450251 TP63Q9H3D4 680 aaPredicted RBP2.21□□□□□ -2.05
USP53-202ENST00000450251 FAM83DQ9H4H8 585 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 ANKRA2Q9H9E1 313 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 THG1LQ9NWX6 298 aaKnown RBP2.21□□□□□ -2.05
USP53-202ENST00000450251 KCTD5Q9NXV2 234 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 TAS2R9Q9NYW1 312 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 NDRG3Q9UGV2 375 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 EVLQ9UI08 416 aaPredicted RBP2.21□□□□□ -2.05
USP53-202ENST00000450251 ZFR2Q9UPR6 939 aaKnown RBP2.21□□□□□ -2.05
USP53-202ENST00000450251 TLR6Q9Y2C9 796 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 MRPS7Q9Y2R9 242 aaKnown RBP2.21□□□□□ -2.05
USP53-202ENST00000450251 DYRK1BQ9Y463 629 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 UGT2A1Q9Y4X1 527 aa2.21□□□□□ -2.05
USP53-202ENST00000450251 ARHGEF28Q8N1W1 1705 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 PARP4Q9UKK3 1724 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 RPTORQ8N122 1335 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 DENND3A2RUS2 1198 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 FSCN2O14926 492 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 HDAC3O15379 428 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 LCMT2O60294 686 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 LRIG2O94898 1065 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 NPPAP01160 153 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 CNPP09543 421 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 MAPTP10636 758 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 TYRP14679 529 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 TFE3P19532 575 aaPredicted RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 TCN1P20061 433 aaPredicted RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 BDNFP23560 247 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 HOXA10P31260 410 aaPredicted RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 CASP3P42574 277 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 OR3A3P47888 321 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 NDST1P52848 882 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 NFATC3Q12968 1075 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 BNIP3Q12983 259 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 KLF10Q13118 480 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 GIT2Q14161 759 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 TCEAL1Q15170 157 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 DLGAP5Q15398 846 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ZBTB6Q15916 424 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 NDUFAF6Q330K2 333 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SFT2D3Q587I9 215 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ODR4Q5SWX8 454 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 KANK2Q63ZY3 851 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 WDR59Q6PJI9 974 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 VSTM1Q6UX27 236 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ZNF574Q6ZN55 896 aaPredicted RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 PRSS48Q7RTY5 328 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ERMP1Q7Z2K6 904 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 COMTD1Q86VU5 262 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 HPS6Q86YV9 775 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SCUBE3Q8IX30 993 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 VWA5B2Q8N398 1253 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ANKRD52Q8NB46 1076 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 TXNDC5Q8NBS9 432 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 STOML3Q8TAV4 291 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 NDNFQ8TB73 568 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 MARVELD3Q96A59 401 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 LURAP1Q96LR2 239 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 OCSTAMPQ9BR26 566 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 GSDMCQ9BYG8 508 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 TRIM54Q9BYV2 358 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 INO80BQ9C086 356 aaPredicted RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 SLC7A5P2Q9GIP4 190 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 DPAGT1Q9H3H5 408 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ALG13Q9NP73 1137 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 ZDHHC18Q9NUE0 388 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 DNAJB9Q9UBS3 223 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 GMEB2Q9UKD1 530 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 MAU2Q9Y6X3 613 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 ASTN2O75129 1339 aaPredicted RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 ZC3H4Q9UPT8 1303 aaKnown RBP2.21□□□□□ -2.06
USP53-202ENST00000450251 A0A087X0T9 212 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 A0A0X1KG70 313 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 FAM237BA0A1B0GVD1 139 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 A0A1B0GVG6 124 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SDR42E2A6NKP2 422 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 NT5C1B-RDH14C9J2C7 533 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 UBAP1LF5GYI3 381 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 NR5A2O00482 541 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 SGCEO43556 437 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 KCNH1O95259 989 aa2.21□□□□□ -2.06
USP53-202ENST00000450251 RASAL1O95294 804 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms