RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 TMEM236Q5W0B7 351 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 CYP20A1Q6UW02 462 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 CYS1Q717R9 158 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 R3HCC1LQ7Z5L2 792 aaKnown RBP8.66□□□□□ -1.02
LSM5-208ENST00000450169 ZBTB33Q86T24 672 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 GATAD2AQ86YP4 633 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 TMEM35BQ8NCS4 154 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 MCUQ8NE86 351 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 OR13J1Q8NGT2 312 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 SGCDQ92629 289 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 DPF3Q92784 378 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 MUL1Q969V5 352 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 MFSD14AQ96MC6 490 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 TRIM15Q9C019 465 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 SDCBP2Q9H190 292 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 CYP26B1Q9NR63 512 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 EVA1BQ9NVM1 165 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 NPAP1Q9NZP6 1156 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 TMEM181Q9P2C4 612 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 GGA1Q9UJY5 639 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 DSEQ9UL01 958 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 MN1Q10571 1320 aaPredicted RBP8.66□□□□□ -1.02
LSM5-208ENST00000450169 SAGE2PA6NJ88 616 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 C16orf96A6NNT2 1141 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 PDZK1P1A8MUH7 402 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.66□□□□□ -1.02
LSM5-208ENST00000450169 SLCO1B7G3V0H7 640 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 SLC16A4O15374 487 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 TBX1O43435 398 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 BBOX1O75936 387 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 DNAJB5O75953 348 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 SRP72O76094 671 aaKnown RBP8.66□□□□□ -1.02
LSM5-208ENST00000450169 PIGNO95427 931 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 NDST3O95803 873 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 ALBP02768 609 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 BMP1P13497 986 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 IMPDH1P20839 514 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 CES1P23141 567 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 GRK3P35626 688 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 OR3A3P47888 321 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 APLP1P51693 650 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 GPLD1P80108 840 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 MAPRE2Q15555 327 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 KIZQ2M2Z5 673 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 RBM48Q5RL73 367 aaKnown RBP8.66□□□□□ -1.02
LSM5-208ENST00000450169 ZNF544Q6NX49 715 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 ZNF534Q76KX8 674 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 CATSPER4Q7RTX7 472 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 AMIGO3Q86WK7 504 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 SVOPQ8N4V2 548 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 ARFGAP1Q8N6T3 406 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 BEST2Q8NFU1 509 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 OR5H6Q8NGV6 325 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 HDAC10Q969S8 669 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 C8orf48Q96LL4 319 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 BCL7BQ9BQE9 202 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 C2orf40Q9H1Z8 148 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 VPS33BQ9H267 617 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 DSN1Q9H410 356 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 SYTL2Q9HCH5 934 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 SNX15Q9NRS6 342 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 PAQR5Q9NXK6 330 aaPredicted RBP8.66□□□□□ -1.02
LSM5-208ENST00000450169 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.66□□□□□ -1.02
LSM5-208ENST00000450169 PSAT1Q9Y617 370 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 FOCADQ5VW36 1801 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 SBF2Q86WG5 1849 aa8.66□□□□□ -1.02
LSM5-208ENST00000450169 AQP12BA6NM10 295 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 LTFP02788 710 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 FCGR1AP12314 374 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 IL32P24001 234 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 HOXA13P31271 388 aaPredicted RBP8.65□□□□□ -1.02
LSM5-208ENST00000450169 CCR10P46092 362 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 SLC7A2P52569 658 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 GP2P55259 537 aaKnown RBP8.65□□□□□ -1.02
LSM5-208ENST00000450169 PRKAA1Q13131 559 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 CUL2Q13617 745 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 ADPRMQ3LIE5 342 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 ARL13AQ5H913 290 aaPredicted RBP8.65□□□□□ -1.02
LSM5-208ENST00000450169 BRMS1LQ5PSV4 323 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 LAYNQ6UX15 382 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 CCBE1Q6UXH8 406 aaPredicted RBP8.65□□□□□ -1.02
LSM5-208ENST00000450169 CMC1Q7Z7K0 106 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 TXNRD3Q86VQ6 643 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 AQP12AQ8IXF9 295 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 PLD6Q8N2A8 252 aaKnown RBP8.65□□□□□ -1.02
LSM5-208ENST00000450169 GALNT6Q8NCL4 622 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 IL17RDQ8NFM7 739 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 OMA1Q96E52 524 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 MOCOSQ96EN8 888 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 CDHR1Q96JP9 859 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 WDR18Q9BV38 432 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 TARS2Q9BW92 718 aaKnown RBP8.65□□□□□ -1.02
LSM5-208ENST00000450169 RSAD1Q9HA92 442 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 AS3MTQ9HBK9 375 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 RPRD1BQ9NQG5 326 aaKnown RBP8.65□□□□□ -1.02
LSM5-208ENST00000450169 NECTIN3Q9NQS3 549 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 ACSS2Q9NR19 701 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 ABI2Q9NYB9 513 aaPredicted RBP8.65□□□□□ -1.02
LSM5-208ENST00000450169 IL37Q9NZH6 218 aa8.65□□□□□ -1.02
LSM5-208ENST00000450169 ZDHHC2Q9UIJ5 367 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms