RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 RASGRP1O95267 797 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 PEX11BO96011 259 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 GP1BAP07359 652 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 CD48P09326 243 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 IL4RP24394 825 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 RPIAP49247 311 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 MAXP61244 160 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 RALGDSQ12967 914 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 MTM1Q13496 603 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 NFATC4Q14934 902 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 PDK2Q15119 407 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 CDKN3Q16667 212 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 LIPIQ6XZB0 460 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 HID1Q8IV36 788 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 RNF214Q8ND24 703 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 IFI44Q8TCB0 444 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 MAPK15Q8TD08 544 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 DNAJC7Q99615 494 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 MGME1Q9BQP7 344 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 LRRC61Q9BV99 259 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 PACSIN1Q9BY11 444 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 NRSN2Q9GZP1 204 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 KLQ9UEF7 1012 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 OR1A2Q9Y585 309 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 PCDHGC4Q9Y5F7 938 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 ANKRD36A6QL64 1941 aa15.35■□□□□ 0.05
CHD3-205ENST00000449744 CACNB4O00305 520 aaPredicted RBP15.34■□□□□ 0.05
CHD3-205ENST00000449744 OPA1O60313 960 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 GCATO75600 419 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 CPP00450 1065 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 KRT7P08729 469 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 TMEM253P0C7T8 217 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 TSHRP16473 764 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 CR2P20023 1033 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 HK3P52790 923 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 ITKQ08881 620 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 COL9A2Q14055 689 aaPredicted RBP15.34■□□□□ 0.05
CHD3-205ENST00000449744 DPYSL3Q14195 570 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 ACOX1Q15067 660 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 ELOCQ15369 112 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 NR0B2Q15466 257 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 ATP13A4Q4VNC1 1196 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 RALGPS1Q5JS13 557 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 TIGD7Q6NT04 549 aaPredicted RBP15.34■□□□□ 0.05
CHD3-205ENST00000449744 RD3Q7Z3Z2 195 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 VSTM4Q8IW00 320 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 PGBD5Q8N414 524 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 FSTL5Q8N475 847 aaPredicted RBP15.34■□□□□ 0.05
CHD3-205ENST00000449744 DCBLD1Q8N8Z6 715 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 FAM71BQ8TC56 605 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 SCG3Q8WXD2 468 aaKnown RBP15.34■□□□□ 0.05
CHD3-205ENST00000449744 TSACCQ96A04 125 aaPredicted RBP15.34■□□□□ 0.05
CHD3-205ENST00000449744 CCDC42Q96M95 316 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 WDR92Q96MX6 357 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 ZNF670Q9BS34 389 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 NOD2Q9HC29 1040 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 NT5MQ9NPB1 228 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 ABHD10Q9NUJ1 306 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 HAUS2Q9NVX0 235 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 B4GALT6Q9UBX8 382 aa15.34■□□□□ 0.05
CHD3-205ENST00000449744 PNMA8BQ9ULN7 279 aaPredicted RBP15.34■□□□□ 0.05
CHD3-205ENST00000449744 LY6G6EA0A0G2JKS1 128 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 LMO7DNF2Z398 122 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 HTRA2O43464 458 aaPredicted RBP15.33■□□□□ 0.04
CHD3-205ENST00000449744 MFSD11O43934 449 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 TNFP01375 233 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 ALPIP09923 528 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 CYP2A6P11509 494 aaPredicted RBP15.33■□□□□ 0.04
CHD3-205ENST00000449744 KELP23276 732 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 ARSEP51690 589 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 SRP54P61011 504 aaKnown RBP15.33■□□□□ 0.04
CHD3-205ENST00000449744 MESDQ14696 234 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 PAFAH1B3Q15102 231 aaKnown RBP15.33■□□□□ 0.04
CHD3-205ENST00000449744 ALG11Q2TAA5 492 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 ASTE1Q2TB18 679 aaPredicted RBP15.33■□□□□ 0.04
CHD3-205ENST00000449744 ANKRD20A8PQ5CZ79 823 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 C6orf132Q5T0Z8 1188 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 NCBP2-AS2Q69YL0 99 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 ESRP1Q6NXG1 681 aaKnown RBP15.33■□□□□ 0.04
CHD3-205ENST00000449744 C19orf48Q6RUI8 117 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 EFL1Q7Z2Z2 1120 aaKnown RBP15.33■□□□□ 0.04
CHD3-205ENST00000449744 CPNE8Q86YQ8 564 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 NDUFAF2Q8N183 169 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 NSMCE3Q96MG7 304 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 DEPDC7Q96QD5 511 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 ANP32EQ9BTT0 268 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 PHTF1Q9UMS5 762 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 U3KQA8 63 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 KNTC1P50748 2209 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 PKD1L2Q7Z442 2459 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 LRRK1Q38SD2 2015 aa15.33■□□□□ 0.04
CHD3-205ENST00000449744 EME2A4GXA9 379 aaPredicted RBP15.32■□□□□ 0.04
CHD3-205ENST00000449744 YY2O15391 372 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 MFAP3LO75121 409 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 KRT10P13645 584 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 HOXB3P14651 431 aaPredicted RBP15.32■□□□□ 0.04
CHD3-205ENST00000449744 VIPR1P32241 457 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 MAN1A1P33908 653 aa15.32■□□□□ 0.04
CHD3-205ENST00000449744 GARSP41250 739 aaKnown RBP15.32■□□□□ 0.04
CHD3-205ENST00000449744 TAS2R40P59535 323 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms