RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ZXDBP98169 803 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 STX3Q13277 289 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 CTBP1Q13363 440 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 CHI3L2Q15782 390 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 SMAD1Q15797 465 aaKnown RBP10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 TSNAXIP1Q2TAA8 658 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 FASTKD1Q53R41 847 aaKnown RBP10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 MRNIPQ6NTE8 343 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 CMC1Q7Z7K0 106 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 CLEC14AQ86T13 490 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 BBS7Q8IWZ6 715 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 CMTM8Q8IZV2 173 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 OR13J1Q8NGT2 312 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 OR6P1Q8NGX9 317 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 FIBINQ8TAL6 211 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 BLOC1S5Q8TDH9 187 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 SLC22A17Q8WUG5 538 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 RMDN1Q96DB5 314 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 ARHGAP9Q9BRR9 750 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 SIKE1Q9BRV8 207 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 SLC46A2Q9BY10 475 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 FAM96AQ9H5X1 160 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 THAP1Q9NVV9 213 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 ZDHHC7Q9NXF8 308 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 TBC1D14Q9P2M4 693 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 VPS51Q9UID3 782 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 PRDM4Q9UKN5 801 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 ACOT9Q9Y305 439 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 OR51B4Q9Y5P0 310 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 TTC24A2A3L6 582 aaPredicted RBP10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 C2orf81A6NN90 581 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 PFDN6O15212 129 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 GLP2RO95838 553 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 CPA3P15088 417 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 OGNP20774 298 aaKnown RBP10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 MZF1P28698 734 aaPredicted RBP10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 CSNK1DP48730 415 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 CSRP3P50461 194 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 PLK1P53350 603 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 GALNT3Q14435 633 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 IHHQ14623 411 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 TAF1AQ15573 450 aaPredicted RBP10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 FSCBQ5H9T9 825 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 SPDYAQ5MJ70 313 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 NCEH1Q6PIU2 408 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 GLT6D1Q7Z4J2 308 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 SDCCAG8Q86SQ7 713 aaPredicted RBP10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 CRLF3Q8IUI8 442 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 CILP2Q8IUL8 1156 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 DENND6AQ8IWF6 608 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 GPR150Q8NGU9 434 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 SHKBP1Q8TBC3 707 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 HDAC10Q969S8 669 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 ALG14Q96F25 216 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 C17orf80Q9BSJ5 609 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 NMRAL1Q9HBL8 299 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 TMEM216Q9P0N5 145 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 DNMT3BQ9UBC3 853 aaKnown RBP10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 COPG2Q9UBF2 871 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 GGT7Q9UJ14 662 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 EMCNQ9ULC0 261 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 CHKBQ9Y259 395 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 RAI2Q9Y5P3 530 aa10.62□□□□□ -0.71
VIPAS39-203ENST00000448935 ANKRD36A6QL64 1941 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 MYO1CO00159 1063 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 SNAP91O60641 907 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 ATP5HO75947 161 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 DXOO77932 396 aaKnown RBP10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 CD160O95971 181 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 SERPINE1P05121 402 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 ATP5BP06576 529 aaKnown RBP10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 RHOP08100 348 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 TCF3P15923 654 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 GABRB3P28472 473 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 RGRP47804 291 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 RPL26P61254 145 aaKnown RBP10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 MPP1Q00013 466 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 BST1Q10588 318 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 ASPHQ12797 758 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 PPM1JQ5JR12 505 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 C16orf46Q6P387 395 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 TTC16Q8NEE8 873 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 TTC8Q8TAM2 541 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 SH3RF2Q8TEC5 729 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 PPP4R1Q8TF05 950 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 C10orf82Q8WW14 230 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 OTUB2Q96DC9 234 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 ELMO2Q96JJ3 720 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 EXOC2Q96KP1 924 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 LRRC37BQ96QE4 947 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 MECRQ9BV79 373 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 NPHS2Q9NP85 383 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 TDP1Q9NUW8 608 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 NLE1Q9NVX2 485 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 LHX3Q9UBR4 397 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 RPL26L1Q9UNX3 145 aaKnown RBP10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 ACTL7AQ9Y615 435 aa10.61□□□□□ -0.71
VIPAS39-203ENST00000448935 ANKRD66B4E2M5 251 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms