RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ZC3H7AQ8IWR0 971 aaKnown RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 CD302Q8IX05 232 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 CCDC24Q8N4L8 307 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 ZFYVE28Q9HCC9 887 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 TMEM8AQ9HCN3 771 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 DHRS12A0PJE2 317 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 TTLL8A6PVC2 850 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 C1orf196B1AJZ1 125 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 MFSD11O43934 449 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 ENTPD5O75356 428 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 HOXA13P31271 388 aaPredicted RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 ACSL1P33121 698 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 RPL22P35268 128 aaKnown RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 GALK1P51570 392 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 XRRA1Q6P2D8 792 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 USP17L2Q6R6M4 530 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 DSELQ8IZU8 1212 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 C2orf69Q8N8R5 385 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 TOR1AIP2Q8NFQ8 470 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 FARSBQ9NSD9 589 aaKnown RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 RBM12Q9NTZ6 932 aaKnown RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 GABBR1Q9UBS5 961 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 PCDHB6Q9Y5E3 794 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 POMCP01189 267 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 PPIL2Q13356 520 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 NIPAL3Q6P499 406 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 PHF21BQ96EK2 531 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 NEURL1BA8MQ27 555 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 MUSKO15146 869 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 PDE8BO95263 885 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 PROCP04070 461 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 CTSKP43235 329 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 ACADVLP49748 655 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 SP140Q13342 867 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 KLHL26Q53HC5 615 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 ARSHQ5FYA8 562 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 CEP295NLQ96MC4 621 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 KXD1Q9BQD3 176 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 LGR4Q9BXB1 951 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 TCF7L1Q9HCS4 588 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 UBQLN2Q9UHD9 624 aa8.97□□□□□ -0.97
NIPBL-202ENST00000448238 RBMX2Q9Y388 322 aaKnown RBP8.97□□□□□ -0.97
NIPBL-202ENST00000448238 A0A087WZ62 844 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 A0A1W2PQJ5 194 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 DCXO43602 365 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 ITGB3P05106 788 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 SETMARQ53H47 684 aaPredicted RBP8.96□□□□□ -0.97
NIPBL-202ENST00000448238 DNAJC14Q6Y2X3 702 aaPredicted RBP8.96□□□□□ -0.97
NIPBL-202ENST00000448238 ACBD4Q8NC06 268 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 PAFAH2Q99487 392 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 DDIT4Q9NX09 232 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 ZNF226Q9NYT6 803 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 TVP23AA6NH52 213 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 PSMG1O95456 288 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 CDC25AP30304 524 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 CCR3P51677 355 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 PRKCDQ05655 676 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 SLC45A4Q5BKX6 768 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 ZNF730Q6ZMV8 503 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 ANKRD13AQ8IZ07 590 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 RAD51AP1Q96B01 352 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 LRRC58Q96CX6 371 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 GPR108Q9NPR9 543 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 CD93Q9NPY3 652 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 GHRLQ9UBU3 117 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 ZMYM2Q9UBW7 1377 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 KBTBD13C9JR72 458 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 TFRCP02786 760 aaKnown RBP8.96□□□□□ -0.97
NIPBL-202ENST00000448238 CATP04040 527 aaKnown RBP8.96□□□□□ -0.97
NIPBL-202ENST00000448238 FGFR3P22607 806 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 RPL10AP62906 217 aaKnown RBP8.96□□□□□ -0.97
NIPBL-202ENST00000448238 MTHFSDQ2M296 383 aaKnown RBP8.96□□□□□ -0.97
NIPBL-202ENST00000448238 NOTUMQ6P988 496 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 TREML1Q86YW5 311 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 ANKS1AQ92625 1134 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 APOPT1Q96IL0 206 aa8.96□□□□□ -0.97
NIPBL-202ENST00000448238 DOCK9Q9BZ29 2069 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 SH2B2O14492 632 aaPredicted RBP8.96□□□□□ -0.98
NIPBL-202ENST00000448238 DNAJA2O60884 412 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 CRTAPO75718 401 aaPredicted RBP8.96□□□□□ -0.98
NIPBL-202ENST00000448238 TACSTD2P09758 323 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 DGKAP23743 735 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 SEPHS1P49903 392 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 MERTKQ12866 999 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 EGFLAMQ63HQ2 1017 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 ASB18Q6ZVZ8 466 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 TRIM74Q86UV6 250 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 TRIM73Q86UV7 250 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 LAPTM4BQ86VI4 370 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 FBXO30Q8TB52 745 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 EPS8L3Q8TE67 593 aaKnown RBP8.96□□□□□ -0.98
NIPBL-202ENST00000448238 TCEAL4Q96EI5 215 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 TMEM169Q96HH4 297 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 TMEM165Q9HC07 324 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 TMEM100Q9NV29 134 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 C1orf109Q9NX04 203 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 BRWD1Q9NSI6 2320 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 A0A0J9YVX5 310 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 CARNS1A5YM72 827 aa8.96□□□□□ -0.98
NIPBL-202ENST00000448238 GRXCR2A6NFK2 248 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms