RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 RFTN1Q14699 578 aaPredicted RBP12.97□□□□□ -0.33
SHC1-210ENST00000448116 MAPRE2Q15555 327 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 HECTD2Q5U5R9 776 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 CNTN4Q8IWV2 1026 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 HMGCLL1Q8TB92 370 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 HDAC10Q969S8 669 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 ZFRQ96KR1 1074 aaKnown RBP12.97□□□□□ -0.33
SHC1-210ENST00000448116 SPAG4Q9NPE6 437 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 KCTD3Q9Y597 815 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 PTGDR2Q9Y5Y4 395 aa12.97□□□□□ -0.33
SHC1-210ENST00000448116 IRAK2O43187 625 aa12.96□□□□□ -0.33
SHC1-210ENST00000448116 NRP2O60462 931 aa12.96□□□□□ -0.33
SHC1-210ENST00000448116 KCNC1P48547 511 aa12.96□□□□□ -0.33
SHC1-210ENST00000448116 HSPA13P48723 471 aa12.96□□□□□ -0.33
SHC1-210ENST00000448116 CCL14Q16627 93 aa12.96□□□□□ -0.33
SHC1-210ENST00000448116 FBXO48Q5FWF7 155 aa12.96□□□□□ -0.33
SHC1-210ENST00000448116 KIAA0930Q6ICG6 404 aaPredicted RBP12.96□□□□□ -0.33
SHC1-210ENST00000448116 RANBP10Q6VN20 620 aa12.96□□□□□ -0.33
SHC1-210ENST00000448116 LRRTM3Q86VH5 581 aa12.96□□□□□ -0.33
SHC1-210ENST00000448116 PHF12Q96QT6 1004 aa12.96□□□□□ -0.33
SHC1-210ENST00000448116 VWA7Q9Y334 891 aa12.96□□□□□ -0.33
SHC1-210ENST00000448116 OR4Q2P0C623 313 aa12.96□□□□□ -0.33
SHC1-210ENST00000448116 ZNF26P17031 533 aaPredicted RBP12.96□□□□□ -0.33
SHC1-210ENST00000448116 PTPRCAPQ14761 206 aa12.96□□□□□ -0.33
SHC1-210ENST00000448116 ZBTB49Q6ZSB9 765 aa12.96□□□□□ -0.33
SHC1-210ENST00000448116 DDIASQ8IXT1 998 aa12.96□□□□□ -0.33
SHC1-210ENST00000448116 TTC30BQ8N4P2 665 aa12.96□□□□□ -0.33
SHC1-210ENST00000448116 DPF3Q92784 378 aa12.96□□□□□ -0.33
SHC1-210ENST00000448116 MAELQ96JY0 434 aaKnown RBP12.96□□□□□ -0.33
SHC1-210ENST00000448116 ZNF512Q96ME7 567 aaPredicted RBP12.96□□□□□ -0.33
SHC1-210ENST00000448116 TREX1Q9NSU2 369 aa12.96□□□□□ -0.33
SHC1-210ENST00000448116 EGFL7Q9UHF1 273 aa12.96□□□□□ -0.33
SHC1-210ENST00000448116 J3KR12 359 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 PPP6CO00743 305 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 RBP1P09455 135 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 IMPDH2P12268 514 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 RPL10P27635 214 aaKnown RBP12.96□□□□□ -0.34
SHC1-210ENST00000448116 SERPINH1P50454 418 aaKnown RBP12.96□□□□□ -0.34
SHC1-210ENST00000448116 ZNF135P52742 658 aaPredicted RBP12.96□□□□□ -0.34
SHC1-210ENST00000448116 ADAM17P78536 824 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 RHDQ02161 417 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 DSC2Q02487 901 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 LRP8Q14114 963 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 IKBKEQ14164 716 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 C9orf131Q5VYM1 1079 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 IFNEQ86WN2 208 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 TTC16Q8NEE8 873 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 TSPAN14Q8NG11 270 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 FAM110BQ8TC76 370 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 SH3RF2Q8TEC5 729 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 C17orf50Q8WW18 174 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 RTP3Q9BQQ7 232 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 EFHD1Q9BUP0 239 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 PTTG2Q9NZH5 202 aa12.96□□□□□ -0.34
SHC1-210ENST00000448116 FAM149AA5PLN7 773 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 LRRC14BA6NHZ5 514 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 HNRNPRO43390 633 aaKnown RBP12.95□□□□□ -0.34
SHC1-210ENST00000448116 SEC24DO94855 1032 aaPredicted RBP12.95□□□□□ -0.34
SHC1-210ENST00000448116 ASLP04424 464 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 PIRTP0C851 137 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 ODC1P11926 461 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 ADRA1AP35348 466 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 CDH15P55291 814 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 PLOD1Q02809 727 aaPredicted RBP12.95□□□□□ -0.34
SHC1-210ENST00000448116 RPS6KA2Q15349 733 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 LDLRAD1Q5T700 205 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 DHFR2Q86XF0 187 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 PELI3Q8N2H9 469 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 TMIGD2Q96BF3 282 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 SLC45A3Q96JT2 553 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 FAR2Q96K12 515 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 TRIM8Q9BZR9 551 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 ZNF696Q9H7X3 374 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 LIN28AQ9H9Z2 209 aaKnown RBP12.95□□□□□ -0.34
SHC1-210ENST00000448116 UTP6Q9NYH9 597 aaKnown RBP12.95□□□□□ -0.34
SHC1-210ENST00000448116 FLRT1Q9NZU1 646 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 TTC3P53804 2025 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 ZSWIM8A7E2V4 1837 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 ARHGAP10A1A4S6 786 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 E9PAM4 449 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 UBFD1O14562 309 aaKnown RBP12.95□□□□□ -0.34
SHC1-210ENST00000448116 SIX3O95343 332 aaPredicted RBP12.95□□□□□ -0.34
SHC1-210ENST00000448116 ARSDP51689 593 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 DNAJB13P59910 316 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 PFKPQ01813 784 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 SLC10A7Q0GE19 358 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 CALML6Q8TD86 181 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 PBXIP1Q96AQ6 731 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 CCDC126Q96EE4 140 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 LRCH3Q96II8 777 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 MS4A4AQ96JQ5 239 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 C3orf30Q96M34 536 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 SLC25A23Q9BV35 468 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 PRKD2Q9BZL6 878 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 UPF3AQ9H1J1 476 aaKnown RBP12.95□□□□□ -0.34
SHC1-210ENST00000448116 MRPL40Q9NQ50 206 aaKnown RBP12.95□□□□□ -0.34
SHC1-210ENST00000448116 SUCOQ9UBS9 1254 aaKnown RBP12.95□□□□□ -0.34
SHC1-210ENST00000448116 RNF11Q9Y3C5 154 aa12.95□□□□□ -0.34
SHC1-210ENST00000448116 F8W810 466 aa12.94□□□□□ -0.34
SHC1-210ENST00000448116 CACNG3O60359 315 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms