RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 C8BP07358 591 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 ZNF26P17031 533 aaPredicted RBP11.52□□□□□ -0.57
GNE-203ENST00000447283 FGFR3P22607 806 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 GABRB3P28472 473 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 GLRBP48167 497 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 ZNF135P52742 658 aaPredicted RBP11.52□□□□□ -0.57
GNE-203ENST00000447283 NR1H2P55055 460 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 PTK2BQ14289 1009 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 GK3PQ14409 553 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 PPP2R5DQ14738 602 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 VARS2Q5ST30 1063 aaKnown RBP11.52□□□□□ -0.57
GNE-203ENST00000447283 TSTD2Q5T7W7 516 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 CLEC20AQ6ZU45 233 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 TMEM173Q86WV6 379 aaPredicted RBP11.52□□□□□ -0.57
GNE-203ENST00000447283 PELI3Q8N2H9 469 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 RNF148Q8N7C7 305 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 OR10T2Q8NGX3 314 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 CEP70Q8NHQ1 597 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 IGSF21Q96ID5 467 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 PRPF18Q99633 342 aaKnown RBP11.52□□□□□ -0.57
GNE-203ENST00000447283 ZBED2Q9BTP6 218 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 MRPL40Q9NQ50 206 aaKnown RBP11.52□□□□□ -0.57
GNE-203ENST00000447283 EPS15L1Q9UBC2 864 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 XPR1Q9UBH6 696 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 APPL1Q9UKG1 709 aa11.52□□□□□ -0.57
GNE-203ENST00000447283 MAGED2Q9UNF1 606 aaPredicted RBP11.52□□□□□ -0.57
GNE-203ENST00000447283 CACNG3O60359 315 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 GJB5O95377 273 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 FAM200BP0CF97 657 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 DNAJB13P59910 316 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 RAB10P61026 200 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 MRPL58Q14197 206 aaKnown RBP11.51□□□□□ -0.57
GNE-203ENST00000447283 PRPSAP1Q14558 356 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 CHSY3Q70JA7 882 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 PIWIL4Q7Z3Z4 852 aaKnown RBP11.51□□□□□ -0.57
GNE-203ENST00000447283 LRRTM3Q86VH5 581 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 SLC41A1Q8IVJ1 513 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 CHERPQ8IWX8 916 aaKnown RBP11.51□□□□□ -0.57
GNE-203ENST00000447283 PIAS4Q8N2W9 510 aaPredicted RBP11.51□□□□□ -0.57
GNE-203ENST00000447283 ABHD8Q96I13 439 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 MARK4Q96L34 752 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 ZNF558Q96NG5 402 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 NPAS2Q99743 824 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 PCDHGA7Q9Y5G6 932 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 LTBP2Q14767 1821 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 ATP6V1B1P15313 513 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 LAG3P18627 525 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 SAT1P21673 171 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 TKTL1P51854 596 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 DAOAP59103 153 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 TXNL4AP83876 142 aaKnown RBP11.51□□□□□ -0.57
GNE-203ENST00000447283 ZNF33AQ06730 810 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 TRIM25Q14258 630 aaKnown RBP11.51□□□□□ -0.57
GNE-203ENST00000447283 MGAT5BQ3V5L5 792 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 CTXN3Q4LDR2 81 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 PCID2Q5JVF3 399 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 PKN3Q6P5Z2 889 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 IYDQ6PHW0 289 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 FAM35AQ86V20 835 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 DCP1BQ8IZD4 617 aaKnown RBP11.51□□□□□ -0.57
GNE-203ENST00000447283 GALNT4Q8N4A0 578 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 BCL7CQ8WUZ0 217 aaPredicted RBP11.51□□□□□ -0.57
GNE-203ENST00000447283 IRGQQ8WZA9 623 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 HERVK_113Q902F9 699 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 MYLPFQ96A32 169 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 NXNL1Q96CM4 212 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 TMA16Q96EY4 203 aaKnown RBP11.51□□□□□ -0.57
GNE-203ENST00000447283 ZNF597Q96LX8 424 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 TMEM209Q96SK2 561 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 PKMYT1Q99640 499 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 TTPALQ9BTX7 342 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 MRPL1Q9BYD6 325 aaKnown RBP11.51□□□□□ -0.57
GNE-203ENST00000447283 MRPL46Q9H2W6 279 aaKnown RBP11.51□□□□□ -0.57
GNE-203ENST00000447283 MRM3Q9HC36 420 aaKnown RBP11.51□□□□□ -0.57
GNE-203ENST00000447283 CXXC1Q9P0U4 656 aaPredicted RBP11.51□□□□□ -0.57
GNE-203ENST00000447283 THEGQ9P2T0 379 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 HSFX1Q9UBD0 423 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 SARDHQ9UL12 918 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 INSL6Q9Y581 213 aa11.51□□□□□ -0.57
GNE-203ENST00000447283 MRPL42Q9Y6G3 142 aaKnown RBP11.51□□□□□ -0.57
GNE-203ENST00000447283 STMN1P16949 149 aa11.5□□□□□ -0.57
GNE-203ENST00000447283 PSMC3P17980 439 aa11.5□□□□□ -0.57
GNE-203ENST00000447283 AVPR1AP37288 418 aa11.5□□□□□ -0.57
GNE-203ENST00000447283 PGGT1BP53609 377 aa11.5□□□□□ -0.57
GNE-203ENST00000447283 PSME3P61289 254 aa11.5□□□□□ -0.57
GNE-203ENST00000447283 ARL13BQ3SXY8 428 aa11.5□□□□□ -0.57
GNE-203ENST00000447283 COL13A1Q5TAT6 717 aaPredicted RBP11.5□□□□□ -0.57
GNE-203ENST00000447283 IL23RQ5VWK5 629 aa11.5□□□□□ -0.57
GNE-203ENST00000447283 ZNF280DQ6N043 979 aa11.5□□□□□ -0.57
GNE-203ENST00000447283 ANKS3Q6ZW76 656 aa11.5□□□□□ -0.57
GNE-203ENST00000447283 TAS1R1Q7RTX1 841 aa11.5□□□□□ -0.57
GNE-203ENST00000447283 CEP97Q8IW35 865 aa11.5□□□□□ -0.57
GNE-203ENST00000447283 CCDC117Q8IWD4 279 aaPredicted RBP11.5□□□□□ -0.57
GNE-203ENST00000447283 PHOSPHO2Q8TCD6 241 aa11.5□□□□□ -0.57
GNE-203ENST00000447283 DUS3LQ96G46 650 aaKnown RBP11.5□□□□□ -0.57
GNE-203ENST00000447283 SMARCD1Q96GM5 515 aa11.5□□□□□ -0.57
GNE-203ENST00000447283 TMEM169Q96HH4 297 aa11.5□□□□□ -0.57
GNE-203ENST00000447283 B3GALT6Q96L58 329 aa11.5□□□□□ -0.57
GNE-203ENST00000447283 TSGA13Q96PP4 275 aa11.5□□□□□ -0.57
GNE-203ENST00000447283 MRPL57Q9BQC6 102 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms