RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CSTF1Q05048 431 aaKnown RBP18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 CALCOCO2Q13137 446 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 MORF4L2Q15014 288 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 DENND2CQ68D51 928 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 ZDHHC24Q6UX98 284 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 LINC00523Q86TU6 105 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 CAND1Q86VP6 1230 aaKnown RBP18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 HOOK3Q86VS8 718 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 MAML2Q8IZL2 1156 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 DNAAF3Q8N9W5 541 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 MCUQ8NE86 351 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 SEC14L1Q92503 715 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 ARNT2Q9HBZ2 717 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 ITM2CQ9NQX7 267 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 USP36Q9P275 1121 aaKnown RBP18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 B4GALT6Q9UBX8 382 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 SHOC2Q9UQ13 582 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 INVSQ9Y283 1065 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 NCKAP1Q9Y2A7 1128 aa18.07■□□□□ 0.48
TRAPPC4-203ENST00000447216 THADAQ6YHU6 1953 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 NPIPB15A6NHN6 443 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 AXIN1O15169 862 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 AVILO75366 819 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 TDGF1P13385 188 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 FNTBP49356 437 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 DRG2P55039 364 aaKnown RBP18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 PLTPP55058 493 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 CERCAMQ5T4B2 595 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 LRRC8BQ6P9F7 803 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 USP30Q70CQ3 517 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 USP45Q70EL2 814 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 TSPAN33Q86UF1 283 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 FAM160A2Q8N612 972 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 FRMD1Q8N878 549 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 BBOF1Q8ND07 529 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 BLOC1S5Q8TDH9 187 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 IFT81Q8WYA0 676 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 SPOCK2Q92563 424 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 MCCC1Q96RQ3 725 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 FAM114A2Q9NRY5 505 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 PPIL1Q9Y3C6 166 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 FADS3Q9Y5Q0 445 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 CUL9Q8IWT3 2517 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 SPAG17Q6Q759 2223 aa18.06■□□□□ 0.48
TRAPPC4-203ENST00000447216 PRR23AA6NEV1 266 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 CAPN8A6NHC0 703 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 AREL1O15033 823 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 BANF1O75531 89 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 SLC4A1P02730 911 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 VIPR1P32241 457 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 ACSL1P33121 698 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 MMP12P39900 470 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 CARSP49589 748 aaKnown RBP18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 SARNPP82979 210 aaKnown RBP18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 CDH17Q12864 832 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 NAA30Q147X3 362 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 FNBP1LQ5T0N5 605 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 ERAP2Q6P179 960 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 KBTBD6Q86V97 674 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 OR14C36Q8NHC7 312 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 FBXO25Q8TCJ0 367 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 ART4Q93070 314 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 FAM131CQ96AQ9 280 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 SCRN2Q96FV2 425 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 SERPINB12Q96P63 405 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 WRAP53Q9BUR4 548 aaKnown RBP18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 ANKZF1Q9H8Y5 726 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 GDF3Q9NR23 364 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 FZD4Q9ULV1 537 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 PLXNA2O75051 1894 aa18.05■□□□□ 0.48
TRAPPC4-203ENST00000447216 GON4LQ3T8J9 2241 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 FAM47DPA6NHR8 397 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 GOLGA8CPA6NN73 597 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 NEMP1O14524 444 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 AURKAO14965 403 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 PLRG1O43660 514 aaKnown RBP18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 GPR37L1O60883 481 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 CYP2A6P11509 494 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 LHCGRP22888 699 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 MGAT1P26572 445 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 ADPRHP54922 357 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 CRADDP78560 199 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 SFSWAPQ12872 951 aaKnown RBP18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 RALGDSQ12967 914 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 MSLNQ13421 630 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 SEPT6Q14141 434 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 POU6F1Q14863 301 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 ERCC6LQ2NKX8 1250 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 MAP7D1Q3KQU3 841 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 CRTC1Q6UUV9 634 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 DPPA4Q7L190 304 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 LYSMD3Q7Z3D4 306 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 NDUFAF2Q8N183 169 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 MPP5Q8N3R9 675 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 UBXN4Q92575 508 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 RAB7BQ96AH8 199 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 XAB2Q9HCS7 855 aaKnown RBP18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 ZDHHC18Q9NUE0 388 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 ZNF711Q9Y462 761 aa18.04■□□□□ 0.48
TRAPPC4-203ENST00000447216 SDK1Q7Z5N4 2213 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms