RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 NYAP1Q6ZVC0 841 aa24.53■■□□□ 1.52
PMS1-214ENST00000446877 SPRED1Q7Z699 444 aa24.53■■□□□ 1.52
PMS1-214ENST00000446877 OR56A4Q8NGH8 313 aa24.53■■□□□ 1.52
PMS1-214ENST00000446877 NOCTQ9UK39 431 aaKnown RBP24.53■■□□□ 1.52
PMS1-214ENST00000446877 ATP8A1Q9Y2Q0 1164 aa24.53■■□□□ 1.52
PMS1-214ENST00000446877 B4DGG1 531 aa24.52■■□□□ 1.52
PMS1-214ENST00000446877 SUV39H1O43463 412 aa24.52■■□□□ 1.52
PMS1-214ENST00000446877 CREB3O43889 395 aa24.52■■□□□ 1.52
PMS1-214ENST00000446877 CD82P27701 267 aa24.52■■□□□ 1.52
PMS1-214ENST00000446877 RFC1P35251 1148 aaPredicted RBP24.52■■□□□ 1.52
PMS1-214ENST00000446877 TRIM72Q6ZMU5 477 aa24.52■■□□□ 1.52
PMS1-214ENST00000446877 PYROXD2Q8N2H3 581 aa24.52■■□□□ 1.52
PMS1-214ENST00000446877 PAF1Q8N7H5 531 aa24.52■■□□□ 1.52
PMS1-214ENST00000446877 OR1E3Q8WZA6 343 aa24.52■■□□□ 1.52
PMS1-214ENST00000446877 SELENOOQ9BVL4 669 aa24.52■■□□□ 1.52
PMS1-214ENST00000446877 TLN1Q9Y490 2541 aaKnown RBP24.52■■□□□ 1.52
PMS1-214ENST00000446877 CFAP69A5D8W1 941 aa24.51■■□□□ 1.51
PMS1-214ENST00000446877 TMEM202A6NGA9 273 aa24.51■■□□□ 1.51
PMS1-214ENST00000446877 NUDT21O43809 227 aaKnown RBP24.51■■□□□ 1.51
PMS1-214ENST00000446877 GPD1P21695 349 aa24.51■■□□□ 1.51
PMS1-214ENST00000446877 MMP12P39900 470 aa24.51■■□□□ 1.51
PMS1-214ENST00000446877 ETV5P41161 510 aa24.51■■□□□ 1.51
PMS1-214ENST00000446877 KIAA1024LP59773 190 aa24.51■■□□□ 1.51
PMS1-214ENST00000446877 MAP9Q49MG5 647 aa24.51■■□□□ 1.51
PMS1-214ENST00000446877 CAMK1DQ8IU85 385 aa24.51■■□□□ 1.51
PMS1-214ENST00000446877 PLA2G15Q8NCC3 412 aa24.51■■□□□ 1.51
PMS1-214ENST00000446877 FUBP1Q96AE4 644 aaKnown RBP24.51■■□□□ 1.51
PMS1-214ENST00000446877 TUBGCP5Q96RT8 1024 aa24.51■■□□□ 1.51
PMS1-214ENST00000446877 DONSONQ9NYP3 566 aa24.51■■□□□ 1.51
PMS1-214ENST00000446877 ADAM22Q9P0K1 906 aa24.51■■□□□ 1.51
PMS1-214ENST00000446877 FOXJ2Q9P0K8 574 aa24.51■■□□□ 1.51
PMS1-214ENST00000446877 MOSPD1Q9UJG1 213 aa24.51■■□□□ 1.51
PMS1-214ENST00000446877 COL12A1Q99715 3063 aa24.5■■□□□ 1.51
PMS1-214ENST00000446877 PPFIA2O75334 1257 aa24.5■■□□□ 1.51
PMS1-214ENST00000446877 PRKCGP05129 697 aa24.5■■□□□ 1.51
PMS1-214ENST00000446877 NSFP46459 744 aaKnown RBP24.5■■□□□ 1.51
PMS1-214ENST00000446877 FMO1Q01740 532 aa24.5■■□□□ 1.51
PMS1-214ENST00000446877 HLTFQ14527 1009 aaKnown RBP eCLIP24.5■■□□□ 1.51
PMS1-214ENST00000446877 KCTD16Q68DU8 428 aa24.5■■□□□ 1.51
PMS1-214ENST00000446877 PIM3Q86V86 326 aa24.5■■□□□ 1.51
PMS1-214ENST00000446877 DTX1Q86Y01 620 aa24.5■■□□□ 1.51
PMS1-214ENST00000446877 UMODL1-AS1Q8N2C9 162 aa24.5■■□□□ 1.51
PMS1-214ENST00000446877 TMEM168Q9H0V1 697 aa24.5■■□□□ 1.51
PMS1-214ENST00000446877 ATP13A3Q9H7F0 1226 aa24.5■■□□□ 1.51
PMS1-214ENST00000446877 FGF22Q9HCT0 170 aa24.5■■□□□ 1.51
PMS1-214ENST00000446877 MRPL40Q9NQ50 206 aaKnown RBP24.5■■□□□ 1.51
PMS1-214ENST00000446877 UBR5O95071 2799 aaPredicted RBP24.5■■□□□ 1.51
PMS1-214ENST00000446877 ANKRD62A6NC57 917 aa24.49■■□□□ 1.51
PMS1-214ENST00000446877 WASH4PA8MWX3 477 aa24.49■■□□□ 1.51
PMS1-214ENST00000446877 C9orf172C9J069 976 aa24.49■■□□□ 1.51
PMS1-214ENST00000446877 TNFRSF10CO14798 259 aa24.49■■□□□ 1.51
PMS1-214ENST00000446877 ZW10O43264 779 aa24.49■■□□□ 1.51
PMS1-214ENST00000446877 BUB1BO60566 1050 aaPredicted RBP24.49■■□□□ 1.51
PMS1-214ENST00000446877 RECQL5O94762 991 aaPredicted RBP24.49■■□□□ 1.51
PMS1-214ENST00000446877 HOXC4P09017 264 aaPredicted RBP24.49■■□□□ 1.51
PMS1-214ENST00000446877 CHRNB2P17787 502 aa24.49■■□□□ 1.51
PMS1-214ENST00000446877 SERPINA4P29622 427 aa24.49■■□□□ 1.51
PMS1-214ENST00000446877 CYP4F2P78329 520 aa24.49■■□□□ 1.51
PMS1-214ENST00000446877 SPECC1LQ69YQ0 1117 aa24.49■■□□□ 1.51
PMS1-214ENST00000446877 WDR59Q6PJI9 974 aa24.49■■□□□ 1.51
PMS1-214ENST00000446877 ZNF574Q6ZN55 896 aaPredicted RBP24.49■■□□□ 1.51
PMS1-214ENST00000446877 SLITRK4Q8IW52 837 aa24.49■■□□□ 1.51
PMS1-214ENST00000446877 KIAA1524Q8TCG1 905 aa24.49■■□□□ 1.51
PMS1-214ENST00000446877 B3GNT4Q9C0J1 378 aa24.49■■□□□ 1.51
PMS1-214ENST00000446877 SEMA6CQ9H3T2 930 aa24.49■■□□□ 1.51
PMS1-214ENST00000446877 CYP4F12Q9HCS2 524 aa24.49■■□□□ 1.51
PMS1-214ENST00000446877 DACH1Q9UI36 760 aa24.49■■□□□ 1.51
PMS1-214ENST00000446877 PDE2AO00408 941 aaPredicted RBP24.48■■□□□ 1.51
PMS1-214ENST00000446877 FGF10O15520 208 aaPredicted RBP24.48■■□□□ 1.51
PMS1-214ENST00000446877 CPNE6O95741 557 aa24.48■■□□□ 1.51
PMS1-214ENST00000446877 ERCC5P28715 1186 aaPredicted RBP24.48■■□□□ 1.51
PMS1-214ENST00000446877 UBE2HP62256 183 aa24.48■■□□□ 1.51
PMS1-214ENST00000446877 POLR2LP62875 67 aaKnown RBP24.48■■□□□ 1.51
PMS1-214ENST00000446877 TSR1Q2NL82 804 aaKnown RBP24.48■■□□□ 1.51
PMS1-214ENST00000446877 AMZ1Q400G9 498 aa24.48■■□□□ 1.51
PMS1-214ENST00000446877 SFTPA2Q8IWL1 248 aa24.48■■□□□ 1.51
PMS1-214ENST00000446877 SLC25A18Q9H1K4 315 aa24.48■■□□□ 1.51
PMS1-214ENST00000446877 GEMIN8Q9NWZ8 242 aaKnown RBP24.48■■□□□ 1.51
PMS1-214ENST00000446877 RHPN2P1A8MT19 583 aa24.47■■□□□ 1.51
PMS1-214ENST00000446877 CALB1P05937 261 aa24.47■■□□□ 1.51
PMS1-214ENST00000446877 ELFN1P0C7U0 828 aa24.47■■□□□ 1.51
PMS1-214ENST00000446877 SOX5P35711 763 aa24.47■■□□□ 1.51
PMS1-214ENST00000446877 B4GALNT1Q00973 533 aa24.47■■□□□ 1.51
PMS1-214ENST00000446877 BIRC2Q13490 618 aa24.47■■□□□ 1.51
PMS1-214ENST00000446877 TMPRSS9Q7Z410 1059 aa24.47■■□□□ 1.51
PMS1-214ENST00000446877 SRLQ86TD4 932 aa24.47■■□□□ 1.51
PMS1-214ENST00000446877 ZSWIM9Q86XI8 627 aa24.47■■□□□ 1.51
PMS1-214ENST00000446877 WDR26Q9H7D7 661 aa24.47■■□□□ 1.51
PMS1-214ENST00000446877 RDH14Q9HBH5 336 aa24.47■■□□□ 1.51
PMS1-214ENST00000446877 SEPT3Q9UH03 358 aa24.47■■□□□ 1.51
PMS1-214ENST00000446877 FZD10Q9ULW2 581 aa24.47■■□□□ 1.51
PMS1-214ENST00000446877 SIGLEC16A6NMB1 481 aa24.46■■□□□ 1.51
PMS1-214ENST00000446877 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.46■■□□□ 1.51
PMS1-214ENST00000446877 STMND1H3BQB6 276 aa24.46■■□□□ 1.51
PMS1-214ENST00000446877 J3KR12 359 aa24.46■■□□□ 1.51
PMS1-214ENST00000446877 PRAMEF11O60813 436 aa24.46■■□□□ 1.51
PMS1-214ENST00000446877 UNGP13051 313 aaPredicted RBP24.46■■□□□ 1.51
PMS1-214ENST00000446877 WT1P19544 449 aaPredicted RBP24.46■■□□□ 1.51
PMS1-214ENST00000446877 EEF1GP26641 437 aaKnown RBP24.46■■□□□ 1.51
PMS1-214ENST00000446877 ALDH4A1P30038 563 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms