RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 ALDH18A1P54886 795 aaKnown RBP17.52■□□□□ 0.4
SMC6-206ENST00000446852 HTRA4P83105 476 aaPredicted RBP17.52■□□□□ 0.4
SMC6-206ENST00000446852 USP4Q13107 963 aa17.52■□□□□ 0.4
SMC6-206ENST00000446852 VWA5B1Q5TIE3 1220 aa17.52■□□□□ 0.4
SMC6-206ENST00000446852 LILRA6Q6PI73 481 aa17.52■□□□□ 0.4
SMC6-206ENST00000446852 ZNF783Q6ZMS7 281 aa17.52■□□□□ 0.4
SMC6-206ENST00000446852 FIBCD1Q8N539 461 aa17.52■□□□□ 0.4
SMC6-206ENST00000446852 SH3RF2Q8TEC5 729 aa17.52■□□□□ 0.4
SMC6-206ENST00000446852 SREK1Q8WXA9 508 aaKnown RBP17.52■□□□□ 0.4
SMC6-206ENST00000446852 RMDN1Q96DB5 314 aa17.52■□□□□ 0.4
SMC6-206ENST00000446852 ASB3Q9Y575 518 aa17.52■□□□□ 0.4
SMC6-206ENST00000446852 DLX3O60479 287 aa17.52■□□□□ 0.39
SMC6-206ENST00000446852 H2AFYO75367 372 aaKnown RBP17.52■□□□□ 0.39
SMC6-206ENST00000446852 CHRNGP07510 517 aa17.52■□□□□ 0.39
SMC6-206ENST00000446852 GRIA4P48058 902 aa17.52■□□□□ 0.39
SMC6-206ENST00000446852 ZNF140P52738 457 aaPredicted RBP17.52■□□□□ 0.39
SMC6-206ENST00000446852 CDKN2DP55273 166 aa17.52■□□□□ 0.39
SMC6-206ENST00000446852 LAMB3Q13751 1172 aa17.52■□□□□ 0.39
SMC6-206ENST00000446852 TSNAXIP1Q2TAA8 658 aa17.52■□□□□ 0.39
SMC6-206ENST00000446852 PDE4DIPQ5VU43 2346 aa17.52■□□□□ 0.39
SMC6-206ENST00000446852 FAM217AQ8IXS0 508 aa17.52■□□□□ 0.39
SMC6-206ENST00000446852 LMNTD2Q8IXW0 634 aa17.52■□□□□ 0.39
SMC6-206ENST00000446852 TMA16Q96EY4 203 aaKnown RBP17.52■□□□□ 0.39
SMC6-206ENST00000446852 LHX3Q9UBR4 397 aa17.52■□□□□ 0.39
SMC6-206ENST00000446852 VPS28Q9UK41 221 aa17.52■□□□□ 0.39
SMC6-206ENST00000446852 CRYL1Q9Y2S2 319 aa17.52■□□□□ 0.39
SMC6-206ENST00000446852 ALPK3Q96L96 1907 aa17.51■□□□□ 0.39
SMC6-206ENST00000446852 CD3EAPO15446 510 aaKnown RBP17.51■□□□□ 0.39
SMC6-206ENST00000446852 HNRNPCL1O60812 293 aaKnown RBP17.51■□□□□ 0.39
SMC6-206ENST00000446852 CSPG5O95196 566 aa17.51■□□□□ 0.39
SMC6-206ENST00000446852 GLP2RO95838 553 aa17.51■□□□□ 0.39
SMC6-206ENST00000446852 CKMP06732 381 aa17.51■□□□□ 0.39
SMC6-206ENST00000446852 SERPINA6P08185 405 aa17.51■□□□□ 0.39
SMC6-206ENST00000446852 GJA1P17302 382 aa17.51■□□□□ 0.39
SMC6-206ENST00000446852 CSKP41240 450 aa17.51■□□□□ 0.39
SMC6-206ENST00000446852 IDH3AP50213 366 aa17.51■□□□□ 0.39
SMC6-206ENST00000446852 RIPK1Q13546 671 aa17.51■□□□□ 0.39
SMC6-206ENST00000446852 CSHL1Q14406 222 aa17.51■□□□□ 0.39
SMC6-206ENST00000446852 SNCBQ16143 134 aa17.51■□□□□ 0.39
SMC6-206ENST00000446852 MDGA1Q8NFP4 955 aa17.51■□□□□ 0.39
SMC6-206ENST00000446852 ALG14Q96F25 216 aa17.51■□□□□ 0.39
SMC6-206ENST00000446852 RAB3IPQ96QF0 476 aaPredicted RBP17.51■□□□□ 0.39
SMC6-206ENST00000446852 MRPL46Q9H2W6 279 aaKnown RBP17.51■□□□□ 0.39
SMC6-206ENST00000446852 STN1Q9H668 368 aaKnown RBP17.51■□□□□ 0.39
SMC6-206ENST00000446852 RIMKLBQ9ULI2 386 aa17.51■□□□□ 0.39
SMC6-206ENST00000446852 ARIH1Q9Y4X5 557 aaPredicted RBP17.51■□□□□ 0.39
SMC6-206ENST00000446852 RAI2Q9Y5P3 530 aa17.51■□□□□ 0.39
SMC6-206ENST00000446852 WISP3O95389 354 aaPredicted RBP17.5■□□□□ 0.39
SMC6-206ENST00000446852 CXCL14O95715 111 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 LRG1P02750 347 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 C8AP07357 584 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 PRSS56P0CW18 603 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 CALB2P22676 271 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 NAGLUP54802 743 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 NSUN2Q08J23 767 aaKnown RBP eCLIP17.5■□□□□ 0.39
SMC6-206ENST00000446852 TRAF2Q12933 501 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 UBAP2LQ14157 1087 aaKnown RBP17.5■□□□□ 0.39
SMC6-206ENST00000446852 LPCAT1Q8NF37 534 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 GPR150Q8NGU9 434 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 ANKRD49Q8WVL7 239 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 MRPS31Q92665 395 aaKnown RBP17.5■□□□□ 0.39
SMC6-206ENST00000446852 ZBED2Q9BTP6 218 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 CCDC106Q9BWC9 280 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 DRC3Q9H069 523 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 CDH19Q9H159 772 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 TLE6Q9H808 572 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 DNAJC28Q9NX36 388 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 CXXC1Q9P0U4 656 aaPredicted RBP17.5■□□□□ 0.39
SMC6-206ENST00000446852 BAIAP2L1Q9UHR4 511 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 VPS51Q9UID3 782 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 VWA7Q9Y334 891 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 MYOFQ9NZM1 2061 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 CCDC22O60826 627 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 ATP5BP06576 529 aaKnown RBP17.5■□□□□ 0.39
SMC6-206ENST00000446852 CDH18Q13634 790 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 ZNF549Q6P9A3 640 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 TMEM207Q6UWW9 146 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 TMC7Q7Z402 723 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 GLT6D1Q7Z4J2 308 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 PIM3Q86V86 326 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 LONP2Q86WA8 852 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 OR4L1Q8NH43 312 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 AGR3Q8TD06 166 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 CLP1Q92989 425 aaKnown RBP17.5■□□□□ 0.39
SMC6-206ENST00000446852 SGF29Q96ES7 293 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 CDKN2AIPNLQ96HQ2 116 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 UBXN10Q96LJ8 280 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 MRPL57Q9BQC6 102 aaKnown RBP17.5■□□□□ 0.39
SMC6-206ENST00000446852 TUBB6Q9BUF5 446 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 GPAMQ9HCL2 828 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 NLE1Q9NVX2 485 aaPredicted RBP17.5■□□□□ 0.39
SMC6-206ENST00000446852 CFAP97Q9P2B7 532 aa17.5■□□□□ 0.39
SMC6-206ENST00000446852 A0A1W2PRU2 124 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 TYW5A2RUC4 315 aaKnown RBP17.49■□□□□ 0.39
SMC6-206ENST00000446852 CRTAMO95727 393 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 CCDC166P0CW27 439 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 ESRRAP11474 423 aaPredicted RBP17.49■□□□□ 0.39
SMC6-206ENST00000446852 CES1P23141 567 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 MPSTP25325 297 aa17.49■□□□□ 0.39
SMC6-206ENST00000446852 PTPRRQ15256 657 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms