RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 TMEM120AQ9BXJ8 343 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 CAPN6Q9Y6Q1 641 aa8.58□□□□□ -1.04
PTPN3-204ENST00000446349 MYH9P35579 1960 aaKnown RBP8.57□□□□□ -1.04
PTPN3-204ENST00000446349 MYH10P35580 1976 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 SMIM28A0A1B0GU29 152 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 MDM4O15151 490 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 RPP40O75818 363 aaKnown RBP8.57□□□□□ -1.04
PTPN3-204ENST00000446349 ACLYP53396 1101 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 RAB14P61106 215 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 NOA1Q8NC60 698 aaKnown RBP8.57□□□□□ -1.04
PTPN3-204ENST00000446349 KREMEN2Q8NCW0 462 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 HGFP14210 728 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 ERCC2P18074 760 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 ME2P23368 584 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 AVPR1BP47901 424 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 GHRHRQ02643 423 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 ITFG1Q8TB96 612 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 ZNF599Q96NL3 588 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 HNRNPABQ99729 332 aaKnown RBP8.57□□□□□ -1.04
PTPN3-204ENST00000446349 DIABLOQ9NR28 239 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 ASTN1O14525 1302 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 ZNF541Q9H0D2 1346 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 MYL12BO14950 172 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 TMCC2O75069 709 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 KCNA3P22001 575 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 TTKP33981 857 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 PPP3CAQ08209 521 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 TBCELQ5QJ74 424 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 ZBTB49Q6ZSB9 765 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 GALNT4Q8N4A0 578 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 PRCCQ92733 491 aaPredicted RBP8.57□□□□□ -1.04
PTPN3-204ENST00000446349 DNAJC19Q96DA6 116 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 PGM2Q96G03 612 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 HEPHQ9BQS7 1158 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 IRX2Q9BZI1 471 aaPredicted RBP8.57□□□□□ -1.04
PTPN3-204ENST00000446349 DDX28Q9NUL7 540 aaKnown RBP8.57□□□□□ -1.04
PTPN3-204ENST00000446349 KIF13AQ9H1H9 1805 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 E2F8A0AVK6 867 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 IL10RBQ08334 325 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 ANGPT1Q15389 498 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 MAPKAPK3Q16644 382 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 RFX4Q33E94 735 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 FBXW10Q5XX13 1052 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 EIF3MQ7L2H7 374 aaKnown RBP8.57□□□□□ -1.04
PTPN3-204ENST00000446349 EFCAB3Q8N7B9 438 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 AZIN2Q96A70 460 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 SNX27Q96L92 541 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 KLQ9UEF7 1012 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 ADGRE2Q9UHX3 823 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 BBIP1A8MTZ0 92 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 MAP3K6O95382 1288 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 C8GP07360 202 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 CCDC166P0CW27 439 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 POU1F1P28069 291 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 IRAK1P51617 712 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 NOMO3P69849 1222 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 VPS26BQ4G0F5 336 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 WASHC2DQ5SRD0 308 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 LIPMQ5VYY2 423 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 CELF5Q8N6W0 485 aaKnown RBP8.57□□□□□ -1.04
PTPN3-204ENST00000446349 ZNF513Q8N8E2 541 aaPredicted RBP8.57□□□□□ -1.04
PTPN3-204ENST00000446349 LPPQ93052 612 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 COPG2Q9UBF2 871 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 SLC27A5Q9Y2P5 690 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 RNASEH2AO75792 299 aaKnown RBP8.57□□□□□ -1.04
PTPN3-204ENST00000446349 NR2F1P10589 423 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 PLK1P53350 603 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 PTPRNQ16849 979 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 NDUFAF6Q330K2 333 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 VARS2Q5ST30 1063 aaKnown RBP8.57□□□□□ -1.04
PTPN3-204ENST00000446349 SLC26A9Q7LBE3 791 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 TRPC4APQ8TEL6 797 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 ZHX1-C8orf76Q96EF9 292 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 PTCD3Q96EY7 689 aaKnown RBP8.57□□□□□ -1.04
PTPN3-204ENST00000446349 NXF3Q9H4D5 531 aaKnown RBP8.57□□□□□ -1.04
PTPN3-204ENST00000446349 GLYATL1P3A0A0U1RQE8 302 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 H3BN98 237 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 CCL16O15467 120 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 LIASO43766 372 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 EPHX1P07099 455 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 ABCB1P08183 1280 aaPredicted RBP8.57□□□□□ -1.04
PTPN3-204ENST00000446349 PDX1P52945 283 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 INAQ16352 499 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 FGD3Q5JSP0 725 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 EPS8L3Q8TE67 593 aaKnown RBP8.57□□□□□ -1.04
PTPN3-204ENST00000446349 CENPTQ96BT3 561 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 SLC2A4RGQ9NR83 387 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 GGA2Q9UJY4 613 aa8.57□□□□□ -1.04
PTPN3-204ENST00000446349 MYH1P12882 1939 aa8.56□□□□□ -1.04
PTPN3-204ENST00000446349 ARL5CA6NH57 179 aa8.56□□□□□ -1.04
PTPN3-204ENST00000446349 SRRM3A6NNA2 597 aaPredicted RBP8.56□□□□□ -1.04
PTPN3-204ENST00000446349 C9J4A7 227 aa8.56□□□□□ -1.04
PTPN3-204ENST00000446349 GPR25O00155 361 aa8.56□□□□□ -1.04
PTPN3-204ENST00000446349 DNM1LO00429 736 aa8.56□□□□□ -1.04
PTPN3-204ENST00000446349 TREHO43280 583 aa8.56□□□□□ -1.04
PTPN3-204ENST00000446349 FSHRP23945 695 aa8.56□□□□□ -1.04
PTPN3-204ENST00000446349 TBL3Q12788 808 aaKnown RBP8.56□□□□□ -1.04
PTPN3-204ENST00000446349 TAB1Q15750 504 aa8.56□□□□□ -1.04
PTPN3-204ENST00000446349 ERICH5Q6P6B1 374 aa8.56□□□□□ -1.04
PTPN3-204ENST00000446349 ZNF605Q86T29 641 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms