RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 MRPL17Q9NRX2 175 aaKnown RBP12.94□□□□□ -0.34
BRPF3-203ENST00000441123 THG1LQ9NWX6 298 aaKnown RBP12.94□□□□□ -0.34
BRPF3-203ENST00000441123 PNMA8BQ9ULN7 279 aaPredicted RBP12.94□□□□□ -0.34
BRPF3-203ENST00000441123 YBEYP58557 167 aaPredicted RBP12.94□□□□□ -0.34
BRPF3-203ENST00000441123 TRAF7Q6Q0C0 670 aa12.94□□□□□ -0.34
BRPF3-203ENST00000441123 ZNF621Q6ZSS3 439 aa12.94□□□□□ -0.34
BRPF3-203ENST00000441123 C16orf59Q7L2K0 433 aa12.94□□□□□ -0.34
BRPF3-203ENST00000441123 HDAC10Q969S8 669 aa12.94□□□□□ -0.34
BRPF3-203ENST00000441123 DGCR14Q96DF8 476 aaKnown RBP12.94□□□□□ -0.34
BRPF3-203ENST00000441123 PPP1R16AQ96I34 528 aa12.94□□□□□ -0.34
BRPF3-203ENST00000441123 B3GNT5Q9BYG0 378 aa12.94□□□□□ -0.34
BRPF3-203ENST00000441123 AK5Q9Y6K8 562 aa12.94□□□□□ -0.34
BRPF3-203ENST00000441123 C1orf232A0A0U1RR37 186 aa12.94□□□□□ -0.34
BRPF3-203ENST00000441123 SLC9A3R1O14745 358 aaPredicted RBP12.94□□□□□ -0.34
BRPF3-203ENST00000441123 NDST2P52849 883 aa12.94□□□□□ -0.34
BRPF3-203ENST00000441123 FAM110CQ1W6H9 321 aa12.94□□□□□ -0.34
BRPF3-203ENST00000441123 MTSS1LQ765P7 747 aa12.94□□□□□ -0.34
BRPF3-203ENST00000441123 RELL1Q8IUW5 271 aa12.94□□□□□ -0.34
BRPF3-203ENST00000441123 LEMD2Q8NC56 503 aa12.94□□□□□ -0.34
BRPF3-203ENST00000441123 PROX1Q92786 737 aa12.94□□□□□ -0.34
BRPF3-203ENST00000441123 CIPCQ9C0C6 399 aa12.94□□□□□ -0.34
BRPF3-203ENST00000441123 RPS6KB2Q9UBS0 482 aa12.94□□□□□ -0.34
BRPF3-203ENST00000441123 VPS51Q9UID3 782 aa12.94□□□□□ -0.34
BRPF3-203ENST00000441123 GPR25O00155 361 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 UMPSP11172 480 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 POLR2EP19388 210 aaKnown RBP12.93□□□□□ -0.34
BRPF3-203ENST00000441123 PSMA3P25788 255 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 DEPDC4Q8N2C3 294 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 C10orf82Q8WW14 230 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 MYDGFQ969H8 173 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 ROPN1LQ96C74 230 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 CAB39LQ9H9S4 337 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 TMPRSS4Q9NRS4 437 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 WRAP73Q9P2S5 460 aaPredicted RBP12.93□□□□□ -0.34
BRPF3-203ENST00000441123 ARIH1Q9Y4X5 557 aaPredicted RBP12.93□□□□□ -0.34
BRPF3-203ENST00000441123 TRAV19A0A0A6YYK7 116 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 H3BNX3 289 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 MATN3O15232 486 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 CLDN11O75508 207 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 EIF2S1P05198 315 aaKnown RBP12.93□□□□□ -0.34
BRPF3-203ENST00000441123 FGFR3P22607 806 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 MPSTP25325 297 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 DNAJB1P25685 340 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 TALDO1P37837 337 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 USP4Q13107 963 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 ACOX1Q15067 660 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 MAP1SQ66K74 1059 aaPredicted RBP12.93□□□□□ -0.34
BRPF3-203ENST00000441123 ACBD6Q9BR61 282 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 TSEN34Q9BSV6 310 aaKnown RBP12.93□□□□□ -0.34
BRPF3-203ENST00000441123 KLHL25Q9H0H3 589 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 SLC25A51Q9H1U9 297 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 CACNA2D2Q9NY47 1150 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 SQORQ9Y6N5 450 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 FAM155BO75949 473 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 CDC42P60953 191 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 IRF8Q02556 426 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 INAQ16352 499 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 ZNF567Q8N184 647 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 S100ZQ8WXG8 99 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 C19orf60Q96EN9 201 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 ZFP42Q96MM3 310 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 ITGB1BP2Q9UKP3 347 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 PTPRJQ12913 1337 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 CD48P09326 243 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 ANXA8L1Q5VT79 327 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 ZNF438Q7Z4V0 828 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 SLC44A2Q8IWA5 706 aaPredicted RBP12.93□□□□□ -0.34
BRPF3-203ENST00000441123 STYXQ8WUJ0 223 aa12.93□□□□□ -0.34
BRPF3-203ENST00000441123 DHX15O43143 795 aaKnown RBP12.92□□□□□ -0.34
BRPF3-203ENST00000441123 HNRNPLP14866 589 aaKnown RBP eCLIP12.92□□□□□ -0.34
BRPF3-203ENST00000441123 SMIM11AP58511 58 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 RPL26P61254 145 aaKnown RBP12.92□□□□□ -0.34
BRPF3-203ENST00000441123 BLMHQ13867 455 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 SLC35G1Q2M3R5 365 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 USP41Q3LFD5 358 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 DSELQ8IZU8 1212 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 KRT78Q8N1N4 520 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 C19orf18Q8NEA5 215 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 FBXO30Q8TB52 745 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 NTAN1Q96AB6 310 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 DCUN1D5Q9BTE7 237 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 NFKBIZQ9BYH8 718 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 KLF11O14901 512 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 CCNA2P20248 432 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 ABL2P42684 1182 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 BTG3Q14201 252 aaPredicted RBP12.92□□□□□ -0.34
BRPF3-203ENST00000441123 OR2T34Q8NGX1 318 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 OR2T3Q8NH03 318 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 Q96MT0 163 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 HMX1Q9NP08 348 aaPredicted RBP12.92□□□□□ -0.34
BRPF3-203ENST00000441123 NUDT5Q9UKK9 219 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 CHKBQ9Y259 395 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 ANGPT4Q9Y264 503 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 SNX8Q9Y5X2 465 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 A0A0J9YYE9 177 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 DYRK3O43781 588 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 LGR5O75473 907 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 USP2O75604 605 aaPredicted RBP12.92□□□□□ -0.34
BRPF3-203ENST00000441123 MAPKAPK2P49137 400 aa12.92□□□□□ -0.34
BRPF3-203ENST00000441123 GNA13Q14344 377 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms