RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 CCDC42Q96M95 316 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 NUDCD1Q96RS6 583 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 LRRC61Q9BV99 259 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 ABHD10Q9NUJ1 306 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 KLQ9UEF7 1012 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 OR1A2Q9Y585 309 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 CPED1A4D0V7 1026 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 CACNB4O00305 520 aaPredicted RBP19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 MFAP3LO75121 409 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 CD48P09326 243 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 RPIAP49247 311 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 PEX5P50542 639 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 ADKP55263 362 aaKnown RBP19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 INSM1Q01101 510 aaPredicted RBP19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 MTM1Q13496 603 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 DPYSL3Q14195 570 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 INPP5AQ14642 412 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 PDK2Q15119 407 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 NR0B2Q15466 257 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 ODF2Q5BJF6 829 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 DENND2CQ68D51 928 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 TIGD7Q6NT04 549 aaPredicted RBP19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 ENPP7Q6UWV6 458 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 FAM181AQ8N9Y4 354 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 IFI44Q8TCB0 444 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 MAPK15Q8TD08 544 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 ZNF830Q96NB3 372 aaPredicted RBP19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 MGME1Q9BQP7 344 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 ZNF670Q9BS34 389 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 TCEAL2Q9H3H9 227 aaPredicted RBP19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 NT5MQ9NPB1 228 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 NENFQ9UMX5 172 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 RAXQ9Y2V3 346 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 PCDHGC4Q9Y5F7 938 aa19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 DSPP15924 2871 aaKnown RBP19.95■□□□□ 0.78
SHROOM1-204ENST00000440118 ZFHX4Q86UP3 3567 aa19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 CFAP69A5D8W1 941 aa19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 TAF4O00268 1085 aa19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 RECQL5O94762 991 aaPredicted RBP19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 RASGRP1O95267 797 aa19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 TMEM253P0C7T8 217 aa19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 GIMD1P0DJR0 217 aa19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 CYP2A6P11509 494 aaPredicted RBP19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 KRT10P13645 584 aa19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 RALGDSQ12967 914 aa19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 CAMK2BQ13554 666 aa19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 MESDQ14696 234 aa19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 LRRC49Q8IUZ0 686 aa19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 CNGA4Q8IV77 575 aa19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 FSTL5Q8N475 847 aaPredicted RBP19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 SCG3Q8WXD2 468 aaKnown RBP19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 WDR92Q96MX6 357 aa19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 APOOQ9BUR5 198 aa19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 NOD2Q9HC29 1040 aa19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 B4GALT6Q9UBX8 382 aa19.94■□□□□ 0.78
SHROOM1-204ENST00000440118 GOLGA6CA6NDK9 693 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 GOLGA6BA6NDN3 693 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 TRAFD1O14545 582 aaPredicted RBP19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 TPP1O14773 563 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 MAP3K6O95382 1288 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 MT-CO3P00414 261 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 GP1BAP07359 652 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 ALPIP09923 528 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 GOLGA6DP0CG33 693 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 TSHRP16473 764 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 KELP23276 732 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 MAN1A1P33908 653 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 GARSP41250 739 aaKnown RBP19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 ARHGEF7Q14155 803 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 ELOCQ15369 112 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 ANKRD20A8PQ5CZ79 823 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 RALGPS1Q5JS13 557 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 ARMC12Q5T9G4 340 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 NCBP2-AS2Q69YL0 99 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 ESRP1Q6NXG1 681 aaKnown RBP19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 LIPIQ6XZB0 460 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 EFL1Q7Z2Z2 1120 aaKnown RBP19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 CPNE8Q86YQ8 564 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 NDUFAF2Q8N183 169 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 PGBD5Q8N414 524 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 RFFLQ8WZ73 363 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 TSACCQ96A04 125 aaPredicted RBP19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 NUS1Q96E22 293 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 TBATAQ96M53 351 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 DEPDC7Q96QD5 511 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 POLR1EQ9GZS1 481 aaKnown RBP19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 SYNDIG1Q9H7V2 258 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 SPTLC3Q9NUV7 552 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 GOLGA6AQ9NYA3 693 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 DKK4Q9UBT3 224 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 SALL4Q9UJQ4 1053 aa19.93■□□□□ 0.78
SHROOM1-204ENST00000440118 URB1O60287 2271 aaKnown RBP19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 LRRD1A4D1F6 860 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 LMO7DNF2Z398 122 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 OPA1O60313 960 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 GCATO75600 419 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 PEX11BO96011 259 aa19.92■□□□□ 0.78
SHROOM1-204ENST00000440118 MX2P20592 715 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms