RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 RPS21P63220 83 aaKnown RBP17.81■□□□□ 0.44
CCDC188-201ENST00000439765 DSC2Q02487 901 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 ZBTB17Q13105 803 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 TUBB2AQ13885 445 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 PDK1Q15118 436 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 UGP2Q16851 508 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 SLC13A5Q86YT5 568 aaPredicted RBP17.81■□□□□ 0.44
CCDC188-201ENST00000439765 ACTRT1Q8TDG2 376 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 SEMA3CQ99985 751 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 HERPUD2Q9BSE4 406 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 TUBB2BQ9BVA1 445 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 SCNM1Q9BWG6 230 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 POLR1EQ9GZS1 481 aaKnown RBP17.81■□□□□ 0.44
CCDC188-201ENST00000439765 PCDH12Q9NPG4 1184 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 RNF14Q9UBS8 474 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 CDC23Q9UJX2 597 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 DMTF1Q9Y222 760 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 PCDHGC4Q9Y5F7 938 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.8■□□□□ 0.44
CCDC188-201ENST00000439765 TRAFD1O14545 582 aaPredicted RBP17.8■□□□□ 0.44
CCDC188-201ENST00000439765 TSPAN6O43657 245 aa17.8■□□□□ 0.44
CCDC188-201ENST00000439765 WNT1P04628 370 aa17.8■□□□□ 0.44
CCDC188-201ENST00000439765 PROS1P07225 676 aa17.8■□□□□ 0.44
CCDC188-201ENST00000439765 CD38P28907 300 aa17.8■□□□□ 0.44
CCDC188-201ENST00000439765 FAM193AP78312 1265 aa17.8■□□□□ 0.44
CCDC188-201ENST00000439765 TRAF2Q12933 501 aa17.8■□□□□ 0.44
CCDC188-201ENST00000439765 FGL2Q14314 439 aa17.8■□□□□ 0.44
CCDC188-201ENST00000439765 KIF19Q2TAC6 998 aa17.8■□□□□ 0.44
CCDC188-201ENST00000439765 CCDC181Q5TID7 509 aa17.8■□□□□ 0.44
CCDC188-201ENST00000439765 UNQ6494/PRO21346Q6UXR6 183 aa17.8■□□□□ 0.44
CCDC188-201ENST00000439765 NAXDQ8IW45 347 aa17.8■□□□□ 0.44
CCDC188-201ENST00000439765 P3H4Q92791 437 aa17.8■□□□□ 0.44
CCDC188-201ENST00000439765 FATE1Q969F0 183 aa17.8■□□□□ 0.44
CCDC188-201ENST00000439765 ECHDC3Q96DC8 303 aa17.8■□□□□ 0.44
CCDC188-201ENST00000439765 FEM1CQ96JP0 617 aa17.8■□□□□ 0.44
CCDC188-201ENST00000439765 CAPZA3Q96KX2 299 aa17.8■□□□□ 0.44
CCDC188-201ENST00000439765 ANKRD6Q9Y2G4 727 aa17.8■□□□□ 0.44
CCDC188-201ENST00000439765 SNX11Q9Y5W9 270 aa17.8■□□□□ 0.44
CCDC188-201ENST00000439765 IGLON5A6NGN9 336 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 PRAMEF26H0Y7S4 382 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 H0Y8X5 98 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 SH3BP5O60239 455 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 SOCS5O75159 536 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 TJP3O95049 919 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 TRIM16O95361 564 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 JCHAINP01591 159 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 FGGP02679 453 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 SPINK2P20155 84 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 HNRNPA2B1P22626 353 aaKnown RBP17.79■□□□□ 0.44
CCDC188-201ENST00000439765 NUDT1P36639 197 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 NR2C2P49116 596 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 C21orf59P57076 290 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 IFI35P80217 286 aaPredicted RBP17.79■□□□□ 0.44
CCDC188-201ENST00000439765 ZC3H18Q86VM9 953 aaKnown RBP17.79■□□□□ 0.44
CCDC188-201ENST00000439765 HCAR2Q8TDS4 363 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 CXorf40AQ8TE69 158 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 GAREM1Q9H706 876 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 HAUS2Q9NVX0 235 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 ATP8A1Q9Y2Q0 1164 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 NEUROG3Q9Y4Z2 214 aa17.79■□□□□ 0.44
CCDC188-201ENST00000439765 SPEGQ15772 3267 aa17.78■□□□□ 0.44
CCDC188-201ENST00000439765 PGRMC1O00264 195 aaKnown RBP17.78■□□□□ 0.44
CCDC188-201ENST00000439765 MMP20O60882 483 aa17.78■□□□□ 0.44
CCDC188-201ENST00000439765 KRT37O76014 449 aa17.78■□□□□ 0.44
CCDC188-201ENST00000439765 CPP00450 1065 aa17.78■□□□□ 0.44
CCDC188-201ENST00000439765 MMP12P39900 470 aa17.78■□□□□ 0.44
CCDC188-201ENST00000439765 ELP6Q0PNE2 266 aa17.78■□□□□ 0.44
CCDC188-201ENST00000439765 KLF1Q13351 362 aaPredicted RBP17.78■□□□□ 0.44
CCDC188-201ENST00000439765 PRKD1Q15139 912 aaPredicted RBP17.78■□□□□ 0.44
CCDC188-201ENST00000439765 LONRF2Q1L5Z9 754 aa17.78■□□□□ 0.44
CCDC188-201ENST00000439765 ZNF423Q2M1K9 1284 aa17.78■□□□□ 0.44
CCDC188-201ENST00000439765 HLA-BQ31612 363 aa17.78■□□□□ 0.44
CCDC188-201ENST00000439765 ALG1LQ6GMV1 187 aa17.78■□□□□ 0.44
CCDC188-201ENST00000439765 ERAP2Q6P179 960 aa17.78■□□□□ 0.44
CCDC188-201ENST00000439765 BBS12Q6ZW61 710 aa17.78■□□□□ 0.44
CCDC188-201ENST00000439765 TMEM145Q8NBT3 493 aa17.78■□□□□ 0.44
CCDC188-201ENST00000439765 TFB1MQ8WVM0 346 aaKnown RBP17.78■□□□□ 0.44
CCDC188-201ENST00000439765 NAP1L3Q99457 506 aaPredicted RBP17.78■□□□□ 0.44
CCDC188-201ENST00000439765 SLC17A9Q9BYT1 436 aa17.78■□□□□ 0.44
CCDC188-201ENST00000439765 IL21RQ9HBE5 538 aa17.78■□□□□ 0.44
CCDC188-201ENST00000439765 FNDC3AQ9Y2H6 1198 aaKnown RBP17.78■□□□□ 0.44
CCDC188-201ENST00000439765 PCDHB9Q9Y5E1 797 aa17.78■□□□□ 0.44
CCDC188-201ENST00000439765 PCDHGB2Q9Y5G2 931 aa17.78■□□□□ 0.44
CCDC188-201ENST00000439765 MRFAP1Q9Y605 127 aa17.78■□□□□ 0.44
CCDC188-201ENST00000439765 ANKRD11Q6UB99 2663 aaPredicted RBP17.78■□□□□ 0.44
CCDC188-201ENST00000439765 COL5A1P20908 1838 aaPredicted RBP17.77■□□□□ 0.44
CCDC188-201ENST00000439765 A0A1W2PR77 199 aa17.77■□□□□ 0.44
CCDC188-201ENST00000439765 TCRBV7S2A1N4TA0A589 114 aa17.77■□□□□ 0.44
CCDC188-201ENST00000439765 C1QTNF9BB2RNN3 333 aa17.77■□□□□ 0.44
CCDC188-201ENST00000439765 RIOK3O14730 519 aaKnown RBP17.77■□□□□ 0.44
CCDC188-201ENST00000439765 VILLO15195 856 aa17.77■□□□□ 0.44
CCDC188-201ENST00000439765 RAD51BO15315 384 aa17.77■□□□□ 0.44
CCDC188-201ENST00000439765 HTRA2O43464 458 aaPredicted RBP17.77■□□□□ 0.44
CCDC188-201ENST00000439765 HYAL3O43820 417 aaPredicted RBP17.77■□□□□ 0.44
CCDC188-201ENST00000439765 CBFA2T3O75081 653 aa17.77■□□□□ 0.44
CCDC188-201ENST00000439765 PAK4O96013 591 aaPredicted RBP17.77■□□□□ 0.44
CCDC188-201ENST00000439765 C1QTNF9P0C862 333 aa17.77■□□□□ 0.44
CCDC188-201ENST00000439765 AKT2P31751 481 aa17.77■□□□□ 0.44
CCDC188-201ENST00000439765 PAFAH1B1P43034 410 aa17.77■□□□□ 0.44
CCDC188-201ENST00000439765 CLDN2P57739 230 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms