RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 PDCD6IPQ8WUM4 868 aaKnown RBP18.91■□□□□ 0.62
CCDC78-204ENST00000439619 WDR92Q96MX6 357 aa18.91■□□□□ 0.62
CCDC78-204ENST00000439619 BOCQ9BWV1 1114 aa18.91■□□□□ 0.62
CCDC78-204ENST00000439619 PCDH18Q9HCL0 1135 aa18.91■□□□□ 0.62
CCDC78-204ENST00000439619 ZNHIT6Q9NWK9 470 aaKnown RBP18.91■□□□□ 0.62
CCDC78-204ENST00000439619 PLXNB3Q9ULL4 1909 aa18.91■□□□□ 0.62
CCDC78-204ENST00000439619 TRPM6Q9BX84 2022 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 EME2A4GXA9 379 aaPredicted RBP18.9■□□□□ 0.62
CCDC78-204ENST00000439619 PDE2AO00408 941 aaPredicted RBP18.9■□□□□ 0.62
CCDC78-204ENST00000439619 GCATO75600 419 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 RECQL5O94762 991 aaPredicted RBP18.9■□□□□ 0.62
CCDC78-204ENST00000439619 TNFP01375 233 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 GYPCP04921 128 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 TPM1P09493 284 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 MYF5P13349 255 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 CASP14P31944 242 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 SRP54P61011 504 aaKnown RBP18.9■□□□□ 0.62
CCDC78-204ENST00000439619 ACOX1Q15067 660 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 ZSCAN23Q3MJ62 389 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 CDCP2Q5VXM1 449 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 DPPA4Q7L190 304 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 ZSWIM9Q86XI8 627 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 MAP7D3Q8IWC1 876 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 CTNNBL1Q8WYA6 563 aaPredicted RBP18.9■□□□□ 0.62
CCDC78-204ENST00000439619 FGF11Q92914 225 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 NUDCD1Q96RS6 583 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 TCEAL2Q9H3H9 227 aaPredicted RBP18.9■□□□□ 0.62
CCDC78-204ENST00000439619 DEF6Q9H4E7 631 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 CTTNBP2NLQ9P2B4 639 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 OR1A2Q9Y585 309 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 WDFY3Q8IZQ1 3526 aa18.9■□□□□ 0.62
CCDC78-204ENST00000439619 LY6G6EA0A0G2JKS1 128 aa18.89■□□□□ 0.61
CCDC78-204ENST00000439619 TRAFD1O14545 582 aaPredicted RBP18.89■□□□□ 0.61
CCDC78-204ENST00000439619 MUSKO15146 869 aa18.89■□□□□ 0.61
CCDC78-204ENST00000439619 YY2O15391 372 aa18.89■□□□□ 0.61
CCDC78-204ENST00000439619 BRINP1O60477 761 aa18.89■□□□□ 0.61
CCDC78-204ENST00000439619 CSO75390 466 aaKnown RBP18.89■□□□□ 0.61
CCDC78-204ENST00000439619 PRKCGP05129 697 aa18.89■□□□□ 0.61
CCDC78-204ENST00000439619 MMP13P45452 471 aa18.89■□□□□ 0.61
CCDC78-204ENST00000439619 SLC25A11Q02978 314 aaKnown RBP18.89■□□□□ 0.61
CCDC78-204ENST00000439619 TRIM14Q14142 442 aa18.89■□□□□ 0.61
CCDC78-204ENST00000439619 ALG11Q2TAA5 492 aa18.89■□□□□ 0.61
CCDC78-204ENST00000439619 GUSBP11Q6P575 273 aa18.89■□□□□ 0.61
CCDC78-204ENST00000439619 LIPIQ6XZB0 460 aa18.89■□□□□ 0.61
CCDC78-204ENST00000439619 PDZD3Q86UT5 571 aa18.89■□□□□ 0.61
CCDC78-204ENST00000439619 ZNF564Q8TBZ8 553 aaPredicted RBP18.89■□□□□ 0.61
CCDC78-204ENST00000439619 SPOCK2Q92563 424 aa18.89■□□□□ 0.61
CCDC78-204ENST00000439619 TSACCQ96A04 125 aaPredicted RBP18.89■□□□□ 0.61
CCDC78-204ENST00000439619 BTBD6Q96KE9 485 aa18.89■□□□□ 0.61
CCDC78-204ENST00000439619 CAAP1Q9H8G2 361 aa18.89■□□□□ 0.61
CCDC78-204ENST00000439619 UVRAGQ9P2Y5 699 aa18.89■□□□□ 0.61
CCDC78-204ENST00000439619 PADI4Q9UM07 663 aa18.89■□□□□ 0.61
CCDC78-204ENST00000439619 U3KQA8 63 aa18.89■□□□□ 0.61
CCDC78-204ENST00000439619 FAM208BQ5VWN6 2430 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 MAFKO60675 156 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 USP12O75317 370 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 TCEA3O75764 348 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 CPP00450 1065 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 H2AFZP0C0S5 128 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 CYP2A6P11509 494 aaPredicted RBP18.88■□□□□ 0.61
CCDC78-204ENST00000439619 TCF4P15884 667 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 EIF2S3P41091 472 aaKnown RBP18.88■□□□□ 0.61
CCDC78-204ENST00000439619 ZFYVE27Q5T4F4 411 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 RBM44Q6ZP01 1051 aaKnown RBP18.88■□□□□ 0.61
CCDC78-204ENST00000439619 H2AFVQ71UI9 128 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 ARL10Q8N8L6 244 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 KCTD6Q8NC69 237 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 OR6C4Q8NGE1 309 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 SNIP1Q8TAD8 396 aaKnown RBP18.88■□□□□ 0.61
CCDC78-204ENST00000439619 MGME1Q9BQP7 344 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 ANP32EQ9BTT0 268 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 WDR26Q9H7D7 661 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 ETNK2Q9NVF9 386 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 GULP1Q9UBP9 304 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 PHTF1Q9UMS5 762 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 PCDHGC4Q9Y5F7 938 aa18.88■□□□□ 0.61
CCDC78-204ENST00000439619 DSPP15924 2871 aaKnown RBP18.87■□□□□ 0.61
CCDC78-204ENST00000439619 A8MX80 341 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 HTRA2O43464 458 aaPredicted RBP18.87■□□□□ 0.61
CCDC78-204ENST00000439619 KRT7P08729 469 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 HOXC4P09017 264 aaPredicted RBP18.87■□□□□ 0.61
CCDC78-204ENST00000439619 KIAA1024LP59773 190 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 GABREP78334 506 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 ITKQ08881 620 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 RALGDSQ12967 914 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 ARHGEF7Q14155 803 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 PDK2Q15119 407 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 TBC1D25Q3MII6 688 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 SPECC1LQ69YQ0 1117 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 TXNRD3NBQ6F5E7 133 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 TIGD7Q6NT04 549 aaPredicted RBP18.87■□□□□ 0.61
CCDC78-204ENST00000439619 TP53INP2Q8IXH6 220 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 SLC35F3Q8IY50 421 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 OR8K1Q8NGG5 319 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 OR56A4Q8NGH8 313 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 ZNF578Q96N58 590 aaPredicted RBP18.87■□□□□ 0.61
CCDC78-204ENST00000439619 XPO4Q9C0E2 1151 aaKnown RBP18.87■□□□□ 0.61
CCDC78-204ENST00000439619 CLPBQ9H078 707 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 B4GALT6Q9UBX8 382 aa18.87■□□□□ 0.61
CCDC78-204ENST00000439619 GPR34Q9UPC5 381 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms