RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 FOXA1P55317 472 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 SLC12A1Q13621 1099 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 TMEM132DQ14C87 1099 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 GJC2Q5T442 439 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-204ENST00000438964 ZNF470Q6ECI4 717 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 EFCAB12Q6NXP0 572 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 CYS1Q717R9 158 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 PSTKQ8IV42 348 aaKnown RBP13.45□□□□□ -0.26
ACTN1-204ENST00000438964 TNIP2Q8NFZ5 429 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 C18orf25Q96B23 403 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-204ENST00000438964 RNF145Q96MT1 663 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 ALPK1Q96QP1 1244 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 FDXACB1Q9BRP7 624 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-204ENST00000438964 CMTM6Q9NX76 183 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 VTI1BQ9UEU0 232 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 NUDT5Q9UKK9 219 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 USP3Q9Y6I4 520 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 ACOX3O15254 700 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 NOBOXO60393 691 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 FARP2O94887 1054 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-204ENST00000438964 STMN1P16949 149 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 ADIGQ0VDE8 80 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 LAPTM5Q13571 262 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 TARBP2Q15633 366 aaKnown RBP13.44□□□□□ -0.26
ACTN1-204ENST00000438964 STXBP2Q15833 593 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 ARHGAP36Q6ZRI8 547 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 ANKRD52Q8NB46 1076 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 SLC35F5Q8WV83 523 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 ELMO1Q92556 727 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 AGPAT4Q9NRZ5 378 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 TBC1D13Q9NVG8 400 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 SYNPO2Q9UMS6 1093 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 ANKRD31Q8N7Z5 1873 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 I6L893 689 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-204ENST00000438964 EEF2KO00418 725 aaKnown RBP13.44□□□□□ -0.26
ACTN1-204ENST00000438964 WNT10BO00744 389 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 CLPXO76031 633 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 MYO1DO94832 1006 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 SLC4A1P02730 911 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 HSPA8P11142 646 aaKnown RBP13.44□□□□□ -0.26
ACTN1-204ENST00000438964 TCF3P15923 654 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 ERCC2P18074 760 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 AGXTP21549 392 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 KCNC1P48547 511 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 PCYT1AP49585 367 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 PLA2G16P53816 162 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 HERC3Q15034 1050 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 INAVAQ3KP66 663 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 RALGPS2Q86X27 583 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-204ENST00000438964 ABI1Q8IZP0 508 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 CAPSLQ8WWF8 208 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 GPR78Q96P69 363 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 GPR22Q99680 433 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 NOL6Q9H6R4 1146 aaKnown RBP13.44□□□□□ -0.26
ACTN1-204ENST00000438964 RIC8BQ9NVN3 520 aa13.44□□□□□ -0.26
ACTN1-204ENST00000438964 PNMA8BQ9ULN7 279 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-204ENST00000438964 TRPC5OSA6NMA1 111 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 FAM155AB1AL88 458 aaPredicted RBP13.43□□□□□ -0.26
ACTN1-204ENST00000438964 TARM1B6A8C7 271 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 ACKR2O00590 384 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 GMNNO75496 209 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 ARIH2O95376 493 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 SLC1A2P43004 574 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 RPS9P46781 194 aaKnown RBP13.43□□□□□ -0.26
ACTN1-204ENST00000438964 TPD52P55327 224 aaPredicted RBP13.43□□□□□ -0.26
ACTN1-204ENST00000438964 PCSK7Q16549 785 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 PAGE2BQ5JRK9 111 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 CYHR1Q6ZMK1 362 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 DNERQ8NFT8 737 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 SLC2A14Q8TDB8 520 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 SEPT8Q92599 483 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 ALOXE3Q9BYJ1 711 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 EHD1Q9H4M9 534 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 ALG9Q9H6U8 611 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 CCM2LQ9NUG4 571 aaPredicted RBP13.43□□□□□ -0.26
ACTN1-204ENST00000438964 GIN1Q9NXP7 522 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 SMPD3Q9NY59 655 aaPredicted RBP13.43□□□□□ -0.26
ACTN1-204ENST00000438964 PKD2L2Q9NZM6 624 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 CACNG4Q9UBN1 327 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 ADAM28Q9UKQ2 775 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 CSADQ9Y600 493 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 SOBPA7XYQ1 873 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 PMPCBO75439 489 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 AP2A1O95782 977 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 CCT8P50990 548 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 PRKAA2P54646 552 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 SLC12A2P55011 1212 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 RAB10P61026 200 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 DGCR6Q14129 220 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 SQLEQ14534 574 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 MEP1AQ16819 746 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 UGT3A2Q3SY77 523 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 R3HCC1LQ7Z5L2 792 aaKnown RBP13.43□□□□□ -0.26
ACTN1-204ENST00000438964 PIM3Q86V86 326 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 STARD8Q92502 1023 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 NAT9Q9BTE0 207 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 SEZ6LQ9BYH1 1024 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 RAD21L1Q9H4I0 556 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 PIGVQ9NUD9 493 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 GIT1Q9Y2X7 761 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms