RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ASAP2O43150 1006 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 LDB2O43679 373 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 DIAPH2O60879 1101 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 NPPBP16860 134 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 GNLYP22749 145 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 AKT1P31749 480 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 PPP3CCP48454 512 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 CYP2J2P51589 502 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 NUDT6P53370 316 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 HILS1P60008 231 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 RNASELQ05823 741 aaKnown RBP3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 POU5F1BQ06416 359 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 PWP2Q15269 919 aaKnown RBP3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 HLFQ16534 295 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 KIF19Q2TAC6 998 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 KRTAP24-1Q3LI83 254 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 PLK5Q496M5 336 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 VWA5B1Q5TIE3 1220 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 SLC30A9Q6PML9 568 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 MOB2Q70IA6 237 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 NRSN1Q8IZ57 195 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 ZNF843Q8N446 348 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 HORMAD2Q8N7B1 307 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 IPO4Q8TEX9 1081 aaKnown RBP3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 DUX5Q96PT3 197 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 MECRQ9BV79 373 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 SARGQ9BW04 601 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 HIPK3Q9H422 1215 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 ZDHHC7Q9NXF8 308 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 IL36RNQ9UBH0 155 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 CELSR1Q9NYQ6 3014 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 CENPEQ02224 2701 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 NIPBLQ6KC79 2804 aaeCLIP3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 CEP162Q5TB80 1403 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 AFDNP55196 1824 aaKnown RBP3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 SLX4Q8IY92 1834 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 SLC38A8A6NNN8 435 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 NTN3O00634 580 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 PIP5K1BO14986 540 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 DNPH1O43598 174 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 SOCS5O75159 536 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 SOX30O94993 753 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 MYL3P08590 195 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 SNRNP70P08621 437 aaKnown RBP3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 UNGP13051 313 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 HOXB9P17482 250 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 TCEA1P23193 301 aaKnown RBP3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 AMTP48728 403 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 DLX5P56178 289 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 KRTAP10-5P60370 271 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 FKBP1BP68106 108 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 SF3A3Q12874 501 aaKnown RBP eCLIP3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 TRAF3Q13114 568 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 SLC39A14Q15043 492 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 LRRC26Q2I0M4 334 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 MPEG1Q2M385 716 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 ZNF284Q2VY69 593 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 FAM171A1Q5VUB5 890 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 IZUMO3Q5VZ72 239 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 WBP2NLQ6ICG8 309 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 HEPHL1Q6MZM0 1159 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 FMNL3Q8IVF7 1028 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 ENDOVQ8N8Q3 282 aaKnown RBP3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 DCPSQ96C86 337 aaKnown RBP3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 CDCA5Q96FF9 252 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 WBP1Q96G27 269 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 RIPOR3Q96MK2 946 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 DOCK7Q96N67 2140 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 INPP4AQ96PE3 977 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 FIZ1Q96SL8 496 aa3.09□□□□□ -1.91
HMGB1P18-201ENST00000438801 UTP20O75691 2785 aaKnown RBP3.09□□□□□ -1.92
HMGB1P18-201ENST00000438801 CELSR2Q9HCU4 2923 aa3.09□□□□□ -1.92
HMGB1P18-201ENST00000438801 VWFP04275 2813 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 LRRC37AA6NMS7 1700 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 A0A0B4J293 547 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 MBD3L5A6NJ08 208 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 RASA4BC9J798 803 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 RASA4O43374 803 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 PLA2G6O60733 806 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 KCNJ13O60928 360 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 KRT36O76013 467 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 TMCC1O94876 653 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 LARGE1O95461 756 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 HLA-DQA2P01906 255 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 MYZAPP0CAP1 466 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 NAGAP17050 411 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 THPOP40225 353 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 HSPA7P48741 367 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 RCAN1P53805 252 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 OAZ1P54368 228 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 TUBA1BP68363 451 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 GRSF1Q12849 480 aaKnown RBP eCLIP3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 PKP1Q13835 747 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 KCNC3Q14003 757 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 CCDC6Q16204 474 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 C5orf22Q49AR2 442 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 HIST2H2BCQ6DN03 193 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 HIST2H2BDQ6DRA6 164 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 FBXL22Q6P050 247 aa3.08□□□□□ -1.92
HMGB1P18-201ENST00000438801 PALB2Q86YC2 1186 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms