RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 CYP2A6P11509 494 aaPredicted RBP24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 NME1P15531 152 aaKnown RBP24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 DGKAP23743 735 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 CDKN2BP42772 138 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 NR2C2P49116 596 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 PEX5P50542 639 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 VAV2P52735 878 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 NAP1L1P55209 391 aaKnown RBP24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 SEMG2Q02383 582 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 WSCD2Q2TBF2 565 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 USP45Q70EL2 814 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 RAB44Q7Z6P3 723 aaPredicted RBP24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 SLCO6A1Q86UG4 719 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 KATNAL2Q8IYT4 538 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 SPC24Q8NBT2 197 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 LGMNQ99538 433 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 SCNM1Q9BWG6 230 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 KCTD5Q9NXV2 234 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 B4GALT6Q9UBX8 382 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 ENC1O14682 589 aa24.83■■□□□ 1.57
RAPGEF1-206ENST00000438647 HYAL3O43820 417 aaPredicted RBP24.83■■□□□ 1.57
RAPGEF1-206ENST00000438647 ALPPL2P10696 532 aa24.83■■□□□ 1.57
RAPGEF1-206ENST00000438647 DYNLT1P63172 113 aa24.83■■□□□ 1.57
RAPGEF1-206ENST00000438647 IFI35P80217 286 aaPredicted RBP24.83■■□□□ 1.57
RAPGEF1-206ENST00000438647 AP1B1Q10567 949 aa24.83■■□□□ 1.57
RAPGEF1-206ENST00000438647 TAZQ16635 292 aa24.83■■□□□ 1.57
RAPGEF1-206ENST00000438647 MACC1Q6ZN28 852 aa24.83■■□□□ 1.57
RAPGEF1-206ENST00000438647 KIAA1328Q86T90 577 aa24.83■■□□□ 1.57
RAPGEF1-206ENST00000438647 RCOR2Q8IZ40 523 aa24.83■■□□□ 1.57
RAPGEF1-206ENST00000438647 PNPLA1Q8N8W4 532 aa24.83■■□□□ 1.57
RAPGEF1-206ENST00000438647 BTN2A2Q8WVV5 523 aa24.83■■□□□ 1.57
RAPGEF1-206ENST00000438647 RBM41Q96IZ5 413 aaKnown RBP24.83■■□□□ 1.57
RAPGEF1-206ENST00000438647 OLFM3Q96PB7 478 aa24.83■■□□□ 1.57
RAPGEF1-206ENST00000438647 TOR4AQ9NXH8 423 aa24.83■■□□□ 1.57
RAPGEF1-206ENST00000438647 NEUROG3Q9Y4Z2 214 aa24.83■■□□□ 1.57
RAPGEF1-206ENST00000438647 RCCD1A6NED2 376 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 GOLGA8CPA6NN73 597 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 KCNK1O00180 336 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 RECQL5O94762 991 aaPredicted RBP24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 DKK1O94907 266 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 JCHAINP01591 159 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 HLA-DQB2P05538 268 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 HTR1BP28222 390 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 VIPR1P32241 457 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 DSC2Q02487 901 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 MTM1Q13496 603 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 ZNF542PQ5EBM4 170 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 TFDP3Q5H9I0 405 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 SPOCD1Q6ZMY3 1216 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 SLC25A45Q8N413 288 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 CHCHD4Q8N4Q1 142 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 ACRBPQ8NEB7 543 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 EXD1Q8NHP7 514 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 LRRN4Q8WUT4 740 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 SCRN2Q96FV2 425 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 SALL4Q9UJQ4 1053 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 REXO2Q9Y3B8 237 aaKnown RBP24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 PCDHGA1Q9Y5H4 931 aa24.82■■□□□ 1.56
RAPGEF1-206ENST00000438647 SPEGQ15772 3267 aa24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 TPRP12270 2363 aaKnown RBP24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 PJA2O43164 708 aa24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 CST8O60676 142 aa24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 TOP3BO95985 862 aaKnown RBP24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 JUNDP17535 347 aa24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 TGM2P21980 687 aa24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 EPHB1P54762 984 aa24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 ZNF211Q13398 564 aaPredicted RBP24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 ARHGEF7Q14155 803 aa24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 ACOX1Q15067 660 aa24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 NPNTQ6UXI9 565 aa24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 TMEM139Q8IV31 216 aa24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 CCDC50Q8IVM0 306 aa24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 OR4C6Q8NH72 309 aa24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 ATL2Q8NHH9 583 aa24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 MCCC1Q96RQ3 725 aaPredicted RBP24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 IL12RB2Q99665 862 aa24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 PPIL1Q9Y3C6 166 aa24.81■■□□□ 1.56
RAPGEF1-206ENST00000438647 A8MX80 341 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 PSMD11O00231 422 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 FZD6O60353 706 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 HEXIM1O94992 359 aaKnown RBP24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 PCCBP05166 539 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 C1SP09871 688 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 CDK4P11802 303 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 SPINK2P20155 84 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 INPP5AQ14642 412 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 TPRG1LQ5T0D9 272 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 KAZNQ674X7 775 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 KDM7AQ6ZMT4 941 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 ARRDC2Q8TBH0 407 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 PIH1D2Q8WWB5 315 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 APOOQ9BUR5 198 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 DUSP23Q9BVJ7 150 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 TDRD1Q9BXT4 1180 aaKnown RBP24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 UCKL1Q9NWZ5 548 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 NLGN3Q9NZ94 848 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 DNPEPQ9ULA0 475 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 CSNK1G3Q9Y6M4 447 aa24.8■■□□□ 1.56
RAPGEF1-206ENST00000438647 LRRK1Q38SD2 2015 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms